Table 2 of Zhao, Mol Vis 2011; 17:1003-1010. Table 2 of Zhao, Mol Vis 2011; 17:1003-1010.
Table 2. LAMA1 sequence variants and PCR and extension primers.
| RefSNP ID | SNP Property | Base Pair Change | Amino acid Change | PCR primer |
|---|---|---|---|---|
| rs2089760 | 5′-flanking | G>A | / | F: TGCATCCTTTTAAAACGGCCAAA |
| R: TTTCCTCTCACTTGTGTGAATCTATTTGA | ||||
| rs566655 | non-synon (exon 14) | A>C | p.Asn674Thr | F:CGTGACCAGCTGATGACTGTCC |
| R:CAATACATACCTGTAAAGAGCCATTTTTGC | ||||
| rs11664063 | non-synon exon 39) | G>A | p.Ala1876Thr | F:GTCTGCCAAAATCAGGCACCAC |
| R:TTCCCACAAAGGCGTGTTCCTA | ||||
| rs607230 | non-synon exon 42) | A>G | p.Lys2002Glu | F:CCAGGCAAACCAATGAATCACTC |
| R:CCTTTGCAAGTAAAAATTTTGCCAATC | ||||
| rs3810046 | 3′-flanking | A>C | / | F:TCCAATTTCTACAACAGACAAGCAATG |
| R:TGCAAAATGCGCTGTTAGGTGA | ||||
| Extension primer | ||||
| rs2089760 SR | TTTTGTGTGAATCTATTTGACAACTCTATCAATT | |||
| rs566655 SF | TTTTTTTTTTTTTTTTTTTTTTGACACATCTTTTGATCAGAGCCA | |||
| rs11664063 SF | CAGAGCTGAGGACCATGCC | |||
| rs607230 SR | AGAAGAAAGTCCTTTCCACTTACCTT | |||
| rs3810046 SF | TTTTTTTTTTTTTTTTTTTTTTCAGACAAGCAATGTTCATTGATTAATT | |||