Table 2 of Zhao, Mol Vis 2011; 17:1003-1010.


Table 2. LAMA1 sequence variants and PCR and extension primers.

RefSNPID SNP Property Base PairChange Amino acid Change PCR primer
rs2089760 5′-flanking G>A / F: TGCATCCTTTTAAAACGGCCAAA
        R: TTTCCTCTCACTTGTGTGAATCTATTTGA
rs566655 non-synon (exon 14) A>C p.Asn674Thr F:CGTGACCAGCTGATGACTGTCC
        R:CAATACATACCTGTAAAGAGCCATTTTTGC
rs11664063 non-synon exon 39) G>A p.Ala1876Thr F:GTCTGCCAAAATCAGGCACCAC
        R:TTCCCACAAAGGCGTGTTCCTA
rs607230 non-synon exon 42) A>G p.Lys2002Glu F:CCAGGCAAACCAATGAATCACTC
        R:CCTTTGCAAGTAAAAATTTTGCCAATC
rs3810046 3′-flanking A>C / F:TCCAATTTCTACAACAGACAAGCAATG
        R:TGCAAAATGCGCTGTTAGGTGA
Extension primer
rs2089760
SR TTTTGTGTGAATCTATTTGACAACTCTATCAATT
rs566655
SF TTTTTTTTTTTTTTTTTTTTTTGACACATCTTTTGATCAGAGCCA
rs11664063
SF CAGAGCTGAGGACCATGCC
rs607230
SR AGAAGAAAGTCCTTTCCACTTACCTT
rs3810046
SF TTTTTTTTTTTTTTTTTTTTTTCAGACAAGCAATGTTCATTGATTAATT