Table 1 of Maki, Mol Vis 2010; 16:72-78. Table 1 of Maki, Mol Vis 2010; 16:72-78.
Table 1. Process of lens-regenerating iris ests assembly into contigs.
Assembly |
Number of sequences |
Number of contigs |
Number of singlets |
Average contig length (bp) |
Average singlet length (bp) |
Total length of sequences (Mbp) |
|---|---|---|---|---|---|---|
| Initial reads after Phred analysis | 10,449 | 943 | 9.85 | |||
| After trimming 20 bases from ends and vector screening | 10,405 | 899 | 9.35 | |||
| After cap3 assembly | 4,725 | 1,368 | 3,357 | 1,279 | 915 | 4.82 |