Table 4 of Tummala, Mol Vis 2010; 16:252-271.

Table 4. Functional annotation analysis (DAVID) of novel gene activations, predicted by Pol-II ChIP-on-Chip.

Function Count (%)
Regulation of transcription 90 14
Gene expression 118 18
Visual perception 13 2
System process (vision) 26 4
Transport 92 14
Phototransduction 3 1
Signal transduction 80 12
Nervous system development 18 3
Neuron development 9 1
Synaptic transmission 5 1
Chromosome organization and biogenesis 12 2
Chromatin modification 5 1
Ion transport 17 3
Central nervous system development 5 1

Gene activations predicted by Pol-II ChIP-on-Chip, which are additional to those reported by two previous microarray studies. The full list of genes (820) and list comparisons are provided in Appendix 4. Of the 820 genes, 463 had sufficient annotations for functional clustering, and the results are summarized in this table.

Tummala, Mol Vis 2010; 16:252-271. http://www.molvis.org/molvis/v16/a32

©2010 Molecular Vision http://www.molvis.org/molvis/

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