Table 2 of Abu-Amero, Mol Vis 2010; 16:2805-2810. Table 2 of Abu-Amero, Mol Vis 2010; 16:2805-2810.
Table 2. Genotype frequencies of the four most common LOXL1 SNPs.
SNP I.D |
Nucleotide change |
Genotype |
XFG patients (n=93) |
Controls (n=101) |
p value |
|---|---|---|---|---|---|
| rs1048661 | g.5758 G>T | G/G | 72 (77.4%) | 57 (56.4%) | 0.409 |
| G/T | 19 (20.4%) | 40 (39.6%) | 1.000 | ||
| T/T | 2 (2.2%) | 4 (4%) | reference | ||
| rs3825942 | g.5794 G>A | G/G | 88 (94.6%) | 70 (69.3%) | 0.049 |
| G/A | 4 (4.3%) | 25 (24.7%) | 1.000 | ||
| A/A | 1 (1.1%) | 6 (6%) | reference | ||
| rs28706550 | g.25067 A>C | A/A | 93 (100%) | 101 (100%) | - |
| A/C | 0 (0) | 0 (0) | - | ||
| C/C | 0 (0) | 0 (0) | reference | ||
| rs35203737 | g.28103 C>A | C/C | 93 (100%) | 101 (100%) | - |
| C/A | 0 (0) | 0 (0) | - | ||
| A/A | 0 (0) | 0 (0) | reference |