Table 3 of Li, Mol Vis 2010; 16:231-239.
SNP |
Primer sequence |
AT (°C) |
Enzyme |
PCR product |
Enzyme products |
---|---|---|---|---|---|
rs2509897 | F:TGGGAGCAGGTCTAGGATT | 60.5 | BslI (NEB) | 170 bp | 29 bp and 141 bp |
R: CAGGAAGAGCTTTAGTGAG | |||||
rs1005510 | F: GGCACAGTCCTCTAAAATAC | 57.7 | BbvI (NEB) | 204 bp | 102 bp and 102 bp |
R: CCTGACTATCCCTCATCTT | |||||
rs11603020 | F:TGGCAAAATGTGAGTCGTGTTCCT | 63 | BstNI (NEB) | 293 bp | 223 bp and 70 bp |
R: GCCAGTTGGGATCCTCTGGGC | |||||
rs2511989 | F: GAAGAAGGACTTTCAACTG | 54.8 | DdeI (NEB) | 102 bp | 21 bp and 81 bp |
R:TGAGAGGCAAATTCACTC |