Table 1 of Gallus, Mol Vis 2010; 16:178-183.
Amplified fragment |
Forward primer (5′-3′) |
Reverse primer (5′-3′) |
PCR length (bp) |
Annealing temperature °C |
---|---|---|---|---|
Promotor | CATGGCTAGTACGGATGTAATT | GGAGAAACTAACCACCATCA | 250 | 55 |
Exon 1 | TGTTTCCGTGACGGACTGAGTA | CCTGAGAGTCACCTGCACATTT | 330 | 56 |
Exon 2 | TCCTTTGTACTGTTACCCTCTC | CTAGTCCATGGTAGAGACACAA | 530 | 54 |
Exon 3 | CATTATTCTTAGTAGATTAATGTG | AAACAGTTAGTGGCAGCTGTGG | 340 | 56 |
Exon 4 | GTAGGGTTGTCATGAGGATTAA | CCTCCATGGTTCTTAAATTT | 270 | 54 |
Exon 4b | GAAATCTGAGATCTCAGACATC | TGGTCTGCAATTTTATTTGCAAC | 250 | 57 |
Exon 5 | TCAGCTTAGGCTGTTGACATCAC | CCAGAACTGCCACGTAATACCT | 300 | 62 |
Exon 5b | TCCCTAGCTTACATCTGTTCCT | TGGCAGAAATGGCTGATTAGTG | 270 | 57 |
Exon 6 | GCAACAGGGAAATGATTGCCTT | AGGTTCTATCATTACACCTTCC | 410 | 56 |
Exon 7 | AGGAGATATGACTTCAAGATTTTGG | CCATCCTCCAAGCACATTAGGTT | 350 | 57 |
Intron 7 | AGGAGATATGACTTCAAGATTTTGG | CATGTTTGTTAAGCTAGAACTG | 900 | 56 |
Intron 7 | CTGCAGTAAATCATGGCATGT | GAGAGAGAAAGAGAGAGGACAG | 650 | 52 |
Intron 7 | CAGTGGATACTTAACCACCC | GAGAACATCAAGAACTTCAG | 450 | 54 |
Exon 8 | CTCTTGACACATCTGTTATATT | GCCTACATCTAGTATGTATA | 270 | 52 |
Exon 9 | CTCAGAGCAGCATTACAAATAGG | AACACAATGAACAGGTCTCACTG | 250 | 57 |
Exon 10 | CAATGCAGTAGCCCTGTCTAGA | GGCTAACGGTACAGCCTTCTTT | 380 | 62 |
Exon 11 | GATAGTTCTCGGGAGTTTGATC | GCTCTACATATCTAGATAGCAGC | 360 | 62 |
Exon 12 and 13 | GTCTTATCTGAATGGATGAG | GCAAAGCTTGGATTGCTAAAGAAG | 420 | 57 |
Exon 14 | CTTGCTATAATGTAGACACAGGG | AAATCCCTATCACAGCTGGAGC | 300 | 62 |
Exon 15 and 16 | TAGGCAGCAGAGCAGGAATTCA | CAGTTCAATTTAAGCTACTCTC | 400 | 56 |
Exon 17 | AGCACATTCGCAGACTTGGTGGTA | GTATGGATGCCAAAGATTGCCAGC | 260 | 68 |
Exon 18 | CCACTTTAACCACTACATCTGG | GAGATAACTGCTCCTAGAGATG | 300 | 62 |
Exon 19 | CCTCCCTTTGGTTATCTCTGAA | GCCTATGAGCCAAGGCAACAATAAAT | 270 | 54 |
Exon 20 | CTTGACTGGTGCGATTTACAGG | GAAAGATAGAGGCTGTGATGGG | 430 | 60 |
Exon 21 | CTGTTTGGCTTGAGCTCGTGTT | TGAGGCTGATACCCCAGTATAC | 430 | 62 |
Exon 22 | GGGCCAGGAGAGAATCTCCACT | TGGATGACTCCTTCACCACTGT | 350 | 62 |
Exon 23 | CTGCCTTCATATTGATATAGCAC | ATTCCTGAGACTGGTCTAGAGC | 300 | 54 |
Exon 24 | TTTACCATATTCATAAGCCGGG | TGTCAGCAAATGTACACGTGAC | 450 | 60 |
Exon 25 | CTTCTCAGTGTGGTTGATCAAC | CCCCAGATGATCAAAGGACTTA | 300 | 50 |
Exon 26 | CTGGTTCTAGTAGTTGTATGTG | AGCTACCACACCTGGCCAGTTT | 350 | 56 |
Exon 27 | GCACTTCCATTAAAGTGTATAGC | ACAAATGGAAATGGGAAAGGTGG | 420 | 62 |
Exon 28 | AAGGTGGTATGGTGAGACTCAT | TACAGCATAAGTGACAAGCAGG | 350 | 62 |