Table 4 of Natoli, Mol Vis 2010; 16:1801-1822. Table 4 of Natoli, Mol Vis 2010; 16:1801-1822.
Table 4. Genes ncRNA regulated by saffron pre-conditioning but not photobiomodulation or light damage.
| Probeset ID | Gene_assignment | Gene symbol | RefSeq | p-value | FC (SafLD/C) |
|---|---|---|---|---|---|
| 10808041 | alanyl-tRNA synthetase | Aars | NM_001100517 | 0.009419 | 2.12845 |
| 10920371 | coiled-coil domain containing 72 | Ccdc72 | NM_001126048 | 0.000362 | −2.15161 |
| 10753771 | Cd47 molecule | Cd47 | NM_019195 | 0.004538 | 2.18358 |
| 10840895 | cytochrome c oxidase subunit IV isoform 2 | Cox4i2 | NM_053472 | 0.006367 | −2.04762 |
| 10860548 | carnitine O-octanoyltransferase | Crot | NM_031987 | 0.000412 | 2.42699 |
| 10871623 | endothelin 2 | Edn2 | NM_012549 | 0.003864 | 2.39144 |
| 10791631 | ectonucleotide pyrophosphatase/phosphodiesterase 6 | Enpp6 | NM_001107311 | 0.048871 | −3.40078 |
| 10740135 | fascin homolog 2, actin-bundling protein, retinal (Stro | Fscn2 | NM_001107072 | 0.002804 | 2.03501 |
| 10938219 | glycerol kinase | Gk | NM_024381 | 0.000123 | 2.16424 |
| 10732439 | guanine nucleotide binding protein (G protein), gamma 1 | Gng13 | NM_001135918 | 0.006565 | −2.23127 |
| 10733680 | glutathione peroxidase 3 | Gpx3 | NM_022525 | 0.00182 | −2.17933 |
| 10715200 | helicase, lymphoid specific | Hells | NM_001106371 | 0.000882 | 2.2618 |
| 10863430 | hexokinase 2 | Hk2 | NM_012735 | 0.029119 | −2.24022 |
| 10733056 | interferon gamma inducible protein 47 | Ifi47 | NM_172019 | 0.001063 | 2.31444 |
| 10714903 | interferon-induced protein with tetratricopeptide repea | Ifit3 | NM_001007694 | 0.004673 | 3.02663 |
| 10753784 | intraflagellar transport 57 homolog (Chlamydomonas) | Ift57 | NM_001107093 | 0.000101 | 2.67228 |
| 10815873 | interleukin 12a | Il12a | NM_053390 | 0.003212 | −2.04998 |
| 10804187 | leucyl-tRNA synthetase | Lars | NM_001009637 | 0.000471 | 2.05987 |
| 10932310 | mediator complex subunit 14 | Med14 | XM_228713 | 0.02603 | 2.23949 |
| 10923270 | oligonucleotide/oligosaccharide-binding fold containin | Obfc2a | NM_001014216 | 8.85E-05 | 2.0681 |
| 10855114 | olfactory receptor 820 | Olr820 | NM_001000974 | 0.025967 | 2.01366 |
| 10830003 | pterin-4 alpha-carbinolamine dehydratase/dimerization c | Pcbd1 | NM_001007601 | 0.009857 | −2.05998 |
| 10708281 | phosphodiesterase 8A | Pde8a | NM_198767 | 0.005571 | −2.00121 |
| 10889475 | peroxidasin homolog (Drosophila) | Pxdn | ENSRNOT00000060139 | 0.00349 | −2.6691 |
| 10803138 | RNA binding motif, single stranded interacting protein | Rbms2 | NM_001025403 | 0.002005 | −2.15568 |
| 10716415 | similar to enolase (46.6 kDa) (2J223) | RGD1308333 | NM_001134505 | 0.015495 | 2.04964 |
| 10820002 | similar to Ac1147 | RGD1563254 | XM_577969 | 0.029198 | −2.23707 |
| 10771190 | similar to ATP-binding cassette, sub-family G (WHI | RGD1564709 | NM_001107205 | 0.044266 | 2.04858 |
| 10797566 | sphingosine-1-phosphate receptor 3 | S1pr3 | ENSRNOT00000019473 | 0.00326 | 2.25911 |
| 10750282 | solute carrier family 5 (inositol transporters), member 3 | Slc5a3 | NM_053715 | 0.002179 | 2.1573 |
| 10842440 | solute carrier family 9 (sodium/hydrogen exchanger), m | Slc9a8 | NM_001025281 | 0.000656 | 2.12805 |
| 10899174 | SWI/SNF related, matrix associated, actin dependent r | Smarcd1 | NM_001108752 | 0.002766 | −2.04334 |
| 10831606 | transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) | Tap1 | NM_032055 | 0.011581 | 2.37179 |
| 10902375 | TBC1 domain family, member 15 | Tbc1d15 | ENSRNOT00000005207 | 0.000945 | 2.0265 |
| 10858370 | ubiquitin specific peptidase 18 | Usp18 | NM_001014058 | 0.019532 | 2.19315 |
| 10907681 | zinc finger protein 385A | Zfp385a | NM_001135088 | 0.000479 | −2.14878 |
| 10846652 | zinc finger protein 385B | Zfp385b | NM_001107736 | 0.001897 | −2.11791 |
| 10840061 | — | — | 0.047419 | 2.15179 | |
| 10924441 | — | — | 0.044499 | 2.20978 | |
| 10891487 | — | — | 0.042933 | 2.01488 | |
| 10886190 | — | — | 0.040809 | −2.64706 | |
| 10898158 | — | — | 0.040237 | −2.11912 | |
| 10930226 | — | — | 0.039217 | −2.1554 | |
| 10915105 | — | — | 0.033403 | −2.30406 | |
| 10886854 | — | — | 0.032145 | 2.23693 | |
| 10731193 | — | — | 0.031476 | 2.4581 | |
| 10843907 | — | — | 0.030096 | 2.01264 | |
| 10875117 | — | — | 0.027972 | 2.25392 | |
| 10801781 | — | — | 0.026332 | 2.81764 | |
| 10825167 | — | — | 0.022483 | −2.8835 | |
| 10722375 | — | — | 0.019218 | −2.05422 | |
| 10803001 | — | — | 0.018227 | 2.34996 | |
| 10819500 | — | — | 0.017801 | 2.16908 | |
| 10766880 | — | — | 0.015099 | 2.10145 | |
| 10938891 | — | — | 0.013364 | 2.13311 | |
| 10776604 | — | — | 0.012016 | −2.84767 | |
| 10757702 | — | — | 0.009955 | −2.06188 | |
| 10867008 | — | — | 0.009246 | −2.29587 | |
| 10891878 | — | — | 0.008961 | −2.10309 | |
| 10830454 | — | — | 0.008641 | −2.44031 | |
| 10827830 | — | — | 0.006903 | 2.30678 | |
| 10897004 | — | — | 0.006062 | 2.01807 | |
| 10742429 | — | — | 0.005794 | 2.98095 | |
| 10834602 | — | — | 0.005352 | −2.59778 | |
| 10926624 | — | — | 0.005005 | 2.14084 | |
| 10781982 | — | — | 0.004882 | 2.31978 | |
| 10896630 | — | — | 0.003343 | −2.13243 | |
| 10930622 | — | — | 0.002504 | 2.29803 | |
| 10756086 | — | — | 0.002238 | 2.23035 | |
| 10923938 | — | — | 0.00188 | 2.22066 | |
| 10938893 | — | — | 0.001545 | 2.49702 | |
| 10899788 | — | — | 0.000365 | −2.13694 | |
| 10766722 | — | — | 8.76E-05 | 2.60553 | |
| 10752219 | — | — | 1.94E-05 | −2.05925 |