Table 4 of Polisetti, Mol Vis 2010; 16:1227-1240. Table 4 of Polisetti, Mol Vis 2010; 16:1227-1240.
Table 4. Comparisons of genes expressed in MC-L and in MSC-BM cells for selected terms of gene ontology. Abbreviations: LEC – limbal epithelial cells, MC-L – Mesenchymal like cells of limbus, MSC-BM – Mesenchymal stem cells of bone marrow. All the genes are highly expressed (up) except those in brackets (down).
Gene Name |
LEC versus MC-L |
LEC versus MSC-BM |
MC-L-MSC-BM |
|---|---|---|---|
| Osteogenesis | |||
| Osteonectin | 5.8 | 3.89 | |
| Collagen, type I, alpha 2 | 10.7 | 10.15 | |
| Connective tissue growth factor | 9.7 | 15.45 | |
| Collagen, type V alpha 2 | 16.7 | 22.2 | |
| Osteopontin | 3.8 | 29.4 | |
| Runt related transcription factor 2 | 5.9 | 5.5 | |
| PDZ and LIM domain 7, transcript variant 4 | 5.3 | 3.29 | |
| Gremlin 2 | 16.1 | 14.29 | |
| Myogenesis | |||
| Transgelin | 4.2 | 5.31 | |
| Meltrin alpha | 10 | 13.78 | |
| Myosin light chain 9, transcript variant 2 | 4.7 | 4.87 | |
| Synocoilin 1 | 8.2 | 5.7 | |
| Tropomyosin1 (alpha), transcript variant 3 | 4.7 | 6.84 | |
| Tropomyosin 2 (beta), transcript variant 2 | 3.5 | 3.75 | |
| Caldesmon 1, transcript variant 1 | 13.8 | 17.7 | |
| Desmuslin, transcript variant A | 26.4 | 27.9 | |
| Leiomodin 1 | 8.5 | 9.29 | |
| Adipogenesis | |||
| Leptin Receptor | 4.94 | 60.58 | 26.74 |
| Leptin | 6.24 | 6.89 | |
| Serum amyloid A1, Transcript variant 1 | 6.8 (down) | 4.2 (down) | 7.7 |
| CCAAT/enhancer binding protein alpha | 4.8 (down) | 3.23 | |
| Chondrogenesis | |||
| Fibromodulin | 10.1 | 13.82 | |
| Decorin, transcript variant A1 | 27.6 | 41.45 | |
| Cartilage oligomeric matrix protein | 8.4 | 11.15 | |
| Tensin 1 | 14.9 | 10.31 | |
| Hyaluronan and proteoglycan link protein | 31 | 47.45 | |
| Collaten, type XI, alpha 1 | 60.18 | 46.12 | |
| Chitanase 3-like 1 | 4.72 | 5.68 | |
| Extracellualr Matrix Components | |||
| Microfibrillar associated protein 5 | 24 | 28.12 | |
| Syndecan 2 | 12.1 | 16.7 | |
| Matrix-remodelling associated 5 | 11.3 | 7.2 | |
| Chondroitin sulfate proteoglycan 4 | 8.3 | 7.5 | |
| Collagen, type VIII, alpha 1, transcript variant 1 | 8.6 | 5.39 | |
| Others | |||
| Procollagen-lysine 1,2-oxoglutarate 5-dioxygenease 1 | 3.2 | 3.3 | |
| Low density lipoprotein-related protein 12 | 3.43 | 3.3 | |
| Notch homolog 2 | 3.78 | 5.2 | |
| Collagen, type VI alpha 1 | 3.9 | 2.39 | |
| Cysteine-rich, angiogenic inducer, 61 | 4 | 4.8 | |
| Glial cell line-derived neurotrophic factor precursor | 4.2 | 6.5 | |
| Endoglin | 4.29 | 4.17 | |
| Collagen, type 1, alpha 2 | 4.3 | 3.3 | |
| Leukemia inhibitory factor receptor alpha (LIFR) | 4.46 | 5.9 | |
| Neuropilin 1 | 4.6 | 4.1 | |
| Colony stimulating factor 1 (Macrophage) | 5.6 | 15.09 | |
| Wingless-type MMTV integration site family, member 5B | 5.7 | 6.06 | |
| Neuronal growth regulator 1 | 6.13 | 8.06 | |
| Noggin | 6.2 | 3.7 | |
| Matrix metallopeptidase 2 | 6.27 | 6.2 | |
| Collagen, type VI, alpha 3, transcript variant 4 | 6.27 | 8.4 | |
| Neuronal PAS domain protein 1 | 6.38 | 5.7 | |
| Fibroblast growth factor receptor 1 | 6.45 | 8.9 | |
| Neuropilin 1, transcript variant 1 | 6.7 | 8.3 | |
| Collagen, type VI, alpha 2 | 7.4 | 6.2 | |
| Collagen, type VI, alpha 1 | 8.0 | 10.2 | |
| Bone marrow stromal cell antigen | 8.2 | 8.4 | |
| Collagen, type V, alpha 1 | 8.4 | 9.3 | |
| Fibronectin 1, transcript variant 7 | 9.24 | 10.14 | |
| Fibroblast growth factor receptor 1, transcript variant 1 | 10.5 | 7.6 | |
| Collagen, type 1 alpha 2 | 10.7 | 10.15 | |
| Angiopoietin 1 | 14.8 | 17.1 | |
| Neuronal cadherin | 8.4 | 13.5 | |