Table 2 of Ren, Mol Vis 2010; 16:1076-1086.


Table 2. Characteristics of primers, probes, and PCR efficiencies of the housekeeping and target genes used in this study.


Gene

Oligo

Sequence
Amplicon
(bps)
PCR
efficiency
GAPDH NM_008084
 
  F TGTGTCCGTCGTGGATCTGA 77
 
  91.3%
 
 
R CCTGCTTCACCACCTTCTTGA
P CCGCCTGGAGAAACCTGCCAAGTATG
LDHA NM_010699
 
  F ATCCCATTTCCACCATGATT 183
 
  86%
 
 
R ACTGCAGCTCCTTCTGGATT
P CAGGCGGGCCTCTTCCTCAG
ACTB NM_007393
 
  F GCAAGCAGGAGTACGATGAG 148
 
  92.7%
 
 
R CCATGCCAATGTTGTCTCTT
P TCCATCGTGCACCGCAAGTG
UBC NM_019639
 
  F ACCAGCAGAGGCTGATCTTT 110
 
  88.7%
 
 
R ACCTCTGAGGCGAAGGACTA
P CTGGAAGATGGCCGCACCCT
PPIA NM_008907
 
  F AATGCTGGACCAAACACAAA 117
 
  100.3%
 
 
R TTCCACAATGTTCATGCCTT
P TGCTTGCCATCCAGCCATTCA
TBP1 NM_013684
 
  F ATCAACATCTCAGCAACCCA 187
 
  97.1%
 
 
R TTGAAGCTGCGGTACAATTC
P ACCACTGCACCGTTGCCAGG
HPRT1 NM_013556
 
  F GGCCAGACTTTGTTGGATTT 155
 
  95.1%
 
 
R CAGATTCAACTTGCGCTCAT
P TGACACAAACGTGATTCAAATCCCTG
RPL5 NM_016980
 
  F GGAAGCACATCATGGGTCAGA 70
 
  91.8%
 
 
R TACGCATCTTCATCTTCCTCCATT
P TGTGGCAGACTACATGCGCTACC
Tkt NM_009388 F GACAGTGCCCTTCTGCAGTACTT 65 101.1%
R CCATGCGAATCTGGTCGAA
P CGCGGCCTTCTTCACACGGG