Table 1 of Abouzeid, Mol Vis 2009; 15:771-777.


Table 1. Primers and PCR conditions.


Region

Primer

Sequence 5′-3′
Amplicon
[bp]
Annealing
[°C]
promoter PromF CTGGACCCACGCCAGGTTTC 340 61
PromR GTTTTGGGCGGCATGACGCCTT
RB exon 1 1F CCGGTTTTTCTCAGGGGACGTTG 340 56.4
1R TTGGCCCCGCCCTACGCACAC
RB exon 2 2F CTATTGAAACAAGTATGTACTG 331 54.3
2R GGGTAATGGAATTATTATTAGC
RB exon 3 3F CAGTTTTAACATAGTATCCAG 281 52.8
3R AGCATTTCTCACTAATTCAC
RB exon 4 4F GTAGTGATTTGATGTAGAGC 305 55
4R CCCAGAATCTAATTGTGAAC
RB exon 5 5F GCATGAGAAAACTACTATGAC 194 54.3
5R CTAACCCTAACTATCAAGATG
RB exon 6 6F CACCCAAAAGATATATCTGG 222 54.3
6R ATTTAGTCCAAAGGAATGCC
RB exon 7 7F CCTGCGATTTTCTCTCATAC 256 55
7R ATGTTTGGTACCCACTAGAC
RB exon 8 8F AGTAGTAGAATGTTACCAAG 380 50.8
8R TACTGCAAAAGAGTTAGCAC
RB exon 9 9F TGCATTGTTCAAGAGTCAAG 222 56
9R AGTTAGACAATTATCCTCCC
RB exon 10 10F TCTTTAATGAAATCTGTGCC 291 56
10R GATATCTAAAGGTCACTAAG
RB exon 11 11F GAGACAACAGAAGCATTATAC 245 54.2
11R CGTGAACAAATCTGAAACAC
RB exon 12 12F GGCAGTGTATTTGAAGATAC 310 52.5
12R AACTACATGTTAGATAGGAG
RB exon 13 13F CTTATGTTCAGTAGTTGTGG 342 54.3
13R TATACGAACTGGAAAGATGC
RB exon 14 14F GTGATTTTCTAAAATAGCAGG 212 58.9
14R TGCCTTGACCTCCTGATCTG
RB exon 15+16 15/16F CAATGCTGACACAAATAAGG 366 55
15/16R AGCATTCCTTCTCCTTAACC
RB exon 17 17F AAAAATACCTAGCTCAAGGG 339 56
17R TGTTAAGAAACACCTCTCAC
RB exon 18 18F TGTACCTGGGAAAATTATGC 340 56.4
18R CTTTATTTGGGTCATGTACC
RB exon 19 19F ATAATCTGTGATTCTTAGCC 273 56
19R AAGAAACATGATTTGAACCC
RB exon 20 20F AAAGAGTGGTAGAAAAGAGG 335 56.4
20R CAGTTAACAAGTAAGTAGGG
RB exon 21 21F AAACCTTTCTTTTTTGAGGC 328 54
21R TACATAATAAGGTCAGACAG
RB exon 22 22F TAATATGTGCTTCTTACCAGTC 313 56
22R TTTAATGTTTTGGTGGACCC
RB exon 23 23F ATCTAATGTAATGGGTCCAC 287 54.2
23R CTTGGATCAAAATAATCCCC
RB exon 24 24F GAATATAGTTTGTCAGTGGTTC 273 52 53
24R GTGTTTGAATAACTGCATTTGG
RB exon 25 25F GGTTGCTAACTATGAAACAC 297 54.2 55
25R AGAAATTGGTATAAGCCAGG
RB exon 26 26F AGTAAGTCATCGAAAGCATC 209 52.8

26R AACGAAAAGACTTCTTGCAG
RB exon 27 27F CGCCATCAGTTTGACATGAG 237 54.2