Table 2 of Luna, Mol Vis 2009; 15:534-544. Table 2 of Luna, Mol Vis 2009; 15:534-544.
Table 2. Genes whose expression was found to change by greater than five fold after exposure to CMS.
Genes upregulated and downregulated in HTM cells after CMS |
Fold |
p value |
GenBank accession number |
|---|---|---|---|
| Heat shock 70 kDa protein 6 (HSP70B') | 489.4 | 0.0206 | NM_002155 |
| Protein phosphatase 1, subunit 14C | 66.58 | 2.84E-05 | NM_030949 |
| Integrin, beta 6 | 59.16 | 0.000405 | NM_000888 |
| Regulator of G-protein signaling 20 | 53.81 | 0.000828 | NM_003702 |
| Chromosome 9 open reading frame 26 (NF-HEV) | 40.98 | 5.60E-05 | NM_033439 |
| Endothelial cell-specific molecule 1 | 33.41 | 0.000613 | NM_007036 |
| Matrix metalloproteinase 3 (stromelysin 1) | 29.78 | 1.13E-05 | NM_002422 |
| Matrix metalloproteinase 10 (stromelysin 2) | 26.72 | 0.000597 | NM_002425 |
| Nm23-phosphorylated unknown substrate | 23.27 | 1.77E-05 | NM_032873 |
| Bone morphogenetic protein 2 | 20.07 | 0.000553 | NM_001200 |
| Neuronal protein | 19.73 | 0.0002 | NM_013259 |
| Hypothetical protein FLJ23657 | 17.56 | 0.000366 | AK074237 |
| T-cell activation kelch repeat protein | 17.12 | 0.000116 | NM_032505 |
| Parathyroid hormone-like hormone | 16.73 | 0.0055 | NM_002820 |
| Hypothetical protein FLJ12604 | 15.98 | 0.000264 | NM_024621 |
| Kruppel-like factor 7 (ubiquitous) | 15.62 | 0.000214 | BC012919 |
| Fibroblast growth factor 1 (acidic) | 13.75 | 0.00479 | NM_000800 |
| Hypothetical protein FLJ13391 | 12.28 | 5.88E-05 | NM_032181 |
| Galanin | 10.68 | 0.000155 | NM_015973 |
| ATPase family, AAA domain containing 3B | 10.64 | 1.38E-05 | NM_031921 |
| Pentaxin-related gene | 9.761 | 0.00016 | NM_002852 |
| Polymerase (RNA) III polypeptide D | 9.255 | 4.25E-06 | NM_001722 |
| Metallothionein 1G | 8.385 | 0.0134 | BC020757 |
| Hypothetical protein MGC11324 | 8.315 | 0.00094 | NM_032717 |
| Heat shock 70 kDa protein 1B | 8.117 | 0.000324 | NM_005346 |
| Potassium voltage-gated channel, member 4 | 7.964 | 6.90E-05 | NM_004978 |
| Nucleoside phosphorylase | 7.604 | 7.38E-05 | NM_000270 |
| Protein phosphatase 1, subunit 15A | 7.104 | 0.000387 | NM_014330 |
| Regulator of G-protein signaling 17 | 6.969 | 0.000364 | NM_012419 |
| Carbohydrate (chondroitin 4) sulfotransferase 11 | 6.801 | 0.00106 | NM_018413 |
| ADP-ribosylation factor-like 7 | 6.475 | 0.000369 | NM_005737 |
| Dickkopf homolog 1 (Xenopus laevis) | 6.464 | 0.000163 | NM_012242 |
| Solute carrier family 17, member 1 | 6.442 | 0.00549 | NM_005074 |
| BTB (POZ) domain containing 11 | 6.193 | 5.74E-05 | NM_152322 |
| Thymic stromal lymphopoietin | 6.189 | 0.00254 | NM_033035 |
| Mitogen-activated protein kinase kinase 4 | 6.099 | 0.00378 | NM_003010 |
| Heat shock 105 kDa/110 kDa protein 1 | 5.997 | 0.000789 | NM_006644 |
| Chemokine (C-C motif) ligand 7 | 5.941 | 0.00053 | NM_006273 |
| Vascular endothelial growth factor C | 5.917 | 7.05E-05 | NM_005429 |
| GTPase activating Rap/RanGAP domain-like 4 | 5.888 | 0.00123 | AB028962 |
| Iduronidase, alpha-L- | 5.829 | 7.76E-05 | NM_000203 |
| T-box 3 (ulnar mammary syndrome) | 5.765 | 6.16E-05 | NM_016569 |
| Hyaluronan synthase 2 | 5.388 | 0.00474 | NM_005328 |
| Heparan sulfate 3-O-sulfotransferase 1 | 5.377 | 0.00618 | NM_005114 |
| Bone morphogenetic protein 6 | 5.079 | 0.00223 | NM_001718 |
| Myosin X | 5.073 | 3.50E-05 | AB018342 |
| Integrin, alpha 2 | 5.06 | 0.0112 | NM_002203 |
| Basic transcription element binding protein 1 | -13.88 | 0.0022 | NM_001206 |
| Contactin 3 (plasmacytoma associated) | -13.41 | 0.00967 | AB040929 |
| Nuclear receptor subfamily 4, group A, member 2 | -13.28 | 0.000121 | NM_006186 |
| Nuclear receptor subfamily 4, group A, member 1 | -12.58 | 0.000702 | NM_173158 |
| Chromosome 20 open reading frame 129 | -10.39 | 0.000593 | NM_030919 |
| Distal-less homeo box 2 | -9.82 | 2.50E-05 | NM_004405 |
| Neuropeptide Y receptor Y1 | -9.366 | 0.00977 | NM_000909 |
| Early growth response 3 | -8.314 | 0.000761 | NM_004430 |
| FBJ murine osteosarcoma viral oncogene homolog B | -8.036 | 0.000207 | NM_006732 |
| Chromosome 2 open reading frame 11 | -7.839 | 0.00422 | NM_144629 |
| B-cell CLL/lymphoma 3 | -7.259 | 0.00165 | NM_005178 |
| Chromosome 6 open reading frame 111 | -7.021 | 0.00265 | NM_032870 |
| Tumor necrosis factor superfamily, member 10 | -6.621 | 0.000944 | NM_003810 |
| F-box protein 32 | -6.561 | 0.00181 | NM_058229 |
| Nuclear receptor subfamily 4, group A, member 3 | -6.488 | 0.000476 | NM_173200 |
| Solute carrier family 40, member 1 | -6.414 | 0.000916 | NM_014585 |
| Phosphodiesterase 5A, cGMP-specific | -6.261 | 0.00289 | NM_001083 |
| Zinc finger protein 36, C3H type-like 2 | -5.684 | 0.000817 | NM_006887 |
| Myeloid/lymphoid or mixed-lineage leukemia | -5.466 | 0.00544 | NM_004529 |
| KIAA1199 | -5.371 | 0.00384 | AB033025 |
| TGFB inducible early growth response | -5.246 | 0.000796 | NM_005655 |