Table 2 of Nakamura, Mol Vis 2009; 15:2905-2910. Table 2 of Nakamura, Mol Vis 2009; 15:2905-2910.
Table 2. Haplotype frequencies of tag SNPs of TLR2 among NTG patients and controls.
Haplotype |
Frequency, % | p |
Pc |
|
|---|---|---|---|---|
| Cases (n=200) | Controls (n=128) | |||
| Block 1 (tag SNPs rs1898830, rs11938228) | ||||
| AC | 51.8 | 52.3 | 0.88 | |
| GA | 46.8 | 46.5 | 0.95 | |
| GC | 1.5 | 1.2 | 0.72 | |
| Block 2 (tag SNPs rs3804099, rs3804100, and rs7656411) | ||||
| TTT | 44.3 | 41.7 | 0.50 | |
| CCG | 29.4 | 24.1 | 0.14 | |
| TTG | 24.4 | 30.6 | 0.081 | |
| CTG | 1.0 | 3.1 | 0.047 | 0.19 |
| Block 1+2 (tag SNPs rs1898830, rs11938228, rs3804099, rs3804100, and rs7656411) | ||||
| GATTG | 22.9 | 29.0 | 0.081 | |
| ACCCG | 26.6 | 21.2 | 0.12 | |
| ACTTT | 22.2 | 26.0 | 0.25 | |
| GATTT | 22.1 | 15.7 | 0.043 | 0.34 |
| ACCTG | 1.0 | 3.1 | 0.044 | 0.35 |
| GACCG | 1.7 | 1.8 | 0.93 | |
| ACTTG | 1.0 | 1.4 | ||
| GCCCG | 1.0 | 1.2 | 0.83 | |