Table 1 of Štabuc-Šilih, Mol Vis 2009; 15:2848-2860.


Table 1. Oligonucleotide primers and PCR temperatures used for single-stranded conformational analysis and sequencing of the COL4A3 gene [29].


COL4A3

Sense primer (5'→3')

Antisense primer (5'→3')
Length
(bp)
Annealing
temperature (°C)
EX 1 CGGACTCGCCCAGGCTCTGA GACGCGTGGAGGAGGGATG 176 62
EX 2 AACAAAACCCTTTCTCTT AAGCAGTATTAGGGTTTGTT 113 49
EX 3 TGTGTGTTTCTCACCTCGT GATTTTCCAAGCTTGCAG 151 54
EX 4 TTTCTTTTTTCACTTGAATCT ACGATCAGGGTGGACTG 99 50
EX 5 CCCCCTCCTTTTTCCTATGT TTTCTAGCTACGGATTTTTC 102 45
EX 6 CCTCATTGAGACTTGTTCT TCATCTTCTGTGTGAAAAGT 116 42
EX 7 AATAATAAGAAACTTTGTATGT GGGAATTAGGCATGCAAA 106 49
EX 8 GTTGTTCATAGGTTGCTTTT TCAGTGACAGCATTCCAC 83 46
EX 9 GATGTTTGATGAACTTCTTC ATAGGGACCTTCTCTGAA 134 52
EX 10 TACTCTTATTCTTCTCTCAA CTGTAGCAAGGATGACT 117 49
EX 11 GTGATTTTCATTTGTGGATT AGCTGTTACATCATATGAACT 93 48
EX 12 AATAATTTGGTTTTGTGTT CCTGCTAATAAAACATAGTA 100 44
EX 13 ACTCCTGAGTGTTTTTGT TAATCATAAAATCGCAGA 126 49
EX 14 TTGTAACAATGTTGAACTGT ATGGGGACAATATAACTTTA 124 50
EX 15 ATAAAATTTGACATGGCTCT GACTAATCAAAACTGCACAT 133 49
EX 16 TTTCATGTTTTTGATTTGTT TGACATTTTTACTACCTCCA 116 46
EX 17 GACCCATTTCTTTTTGTTCT AAAATAGGCTATTAGGGAGA 110 48
EX 18 CACAATTTGTAAATGTCTT GATATTGTCTTTAATCACAC 94 46
EX 19 TCTGTATTTGTTTCTTTCTC AAATGCTTTAGGAAGAAAT 141 52
EX 20 TTATATCTTTCTAAGCCATT CCTTTGTAATAGCATTTCTA 125 47
EX 21 TCTCCATTGTGCAATTTTTA CTAAGCTGTGAGGAGGGTTT 367 53
EX 22 ATTGTCTTTGGTGCTGTAT GGCTTATCCTAATACAACAT 156 49
EX 23 AAGTAATGCTAGTATGCTCTC TGTGCTTGCAAAAACACT 162 49
EX 24 TAGTTAATAATTCGTTGA AAGATTTAAAAACATGAA 121 44
EX 25 ACAGATTCATTTGTGTACTA GAGGGTAAAGTTGCTAAATA 234 54
EX 26 ATTCAAACACATTCCTGT GGACTGGAAAGAAAACTAA 219 51
EX 27 ATCTTATGACCACAAATTTC CAGATTTGGCAGAGGATA 142 54
EX 28 AGATGCATATGTGTATTTGT CTTCTAAATATCCACAACAA 182 44
EX 29 CTAATCCTACAACAATGTTT TTCTGTGATAGCTTGAATTT 164 47
EX 30 ATAGTAATAACACAATTTCT GAGAAAAGTAATGACACT 209 45
EX 31 CCTGGGTATATACTTGTGCT ATGTCTCCTGCCCTTCTGG 191 52
EX 32 GGAAAGCATTTGTGGGTTA ACAGAGCCACCTTAAGAAGA 276 52
EX 33 TGCTTTGTGTTAATTTGTTT TCCTGCTATTTAGAAAGACA 149 52
EX 34 AAGGACCTGATGTTGTTACT TCTGATGTCCTGATTCCA 202 52
EX 35 TTCTTGTTAATACCTGGTTT TGATATTTTTCTATTTGAGA 160 49
EX 36 CAGGGCAATAACTACTTA GCTCATAACAGGACCTTA 146 50
EX 37 TACTCTATGTTTTCCCCCTA TCCACCACTAAAATGTAAAT 206 52
EX 38 TATGAGAATTTTAAAGGTAT TCCAGCTTTTAGAATTGTAA 195 48
EX 39 GGTGATCTTTTTTCTTCCTT CCCACATGAAAAGGAAAAAG 160 50
EX 40 GGGGTTTTGGGTTTTTTT ACGGATCAAAGATAATGAGCA 156 52
EX 41 CAATTATTAACATGCCAAGA TACATTAGGACAGGGAAGAA 112 50
EX 42 AAAGAAACTTATTAAGCCTT TTGTTATTTTATGCTGTTTA 253 52
EX 43 ATACTGACAGACTTTTCAT TAATAATGAGTCAAAATAAT 191 50
EX 44 GTTTTGCTCCCTTTATTTGA ATATAAAGAGCAATGCACAA 129 51
EX 45 GGAAACCCATTGATCTAAGT ACCTTTCTTCATTGACAGCA 164 51
EX 46 TGAGGCCATCATCTTCTTCT TCCTAGTGATCCAAGTCAAT 199 50
EX 47 CCACCTTACTTTTCATCCTAT ACTTCTTCGGTGAGGAAAC 190 59
EX 48 CTTTGAAAAAACGAGTTTAAG TTACAATCTGCATGTGGAA 324 61
EX 49 CTAGTAACGATGCTGAAAATAAC TCACTTGGTCCCATTGTAA 284 54
EX 50 TTCCCTTGTAATGGAATGAAA CACATTTTACCCAGCACAAT 271 52
EX 51 AACCCCAATGGACAGAGTGTT TGAATAGTTCTGCAATTGAGT 272 63
EX 52 CAGCAAAAATTCCCTTTTATG TGTTCTTTAGGATGAAAAAT 190 47