Table 2 of Schippert, Mol Vis 2009; 15:2720-2739.
Affymetrix ID |
Gene symbol |
Gene title |
FC (wt/p30 vs hm/p30) |
p-value (wt/p30 vs hm/p30) |
FC (wt/p42 vs hm/p42) |
p-value (wt/p42 vs hm/p42) |
---|---|---|---|---|---|---|
Translation factor activity (1) | ||||||
1438686_at | Eif4g1 | eukaryotic translation initiation factor 4, gamma 1 | −1.71 | 0.0207 | −1.15 | 0.1370 |
Electron Carrier Activity (1) | ||||||
1417590_at | Cyp27a1 | cytochrome P450, family 27, subfamily a, polypeptide 1 | 1.54 | 0.0047 | −1.09 | 0.5424 |
Structural molecule activity (2) | ||||||
1418306_at | Crybb1 | crystallin, beta B1 | −1.98 | 0.0291 | −1.40 | 0.5518 |
1419011_at | Cryba2 | crystallin, beta A2 | −2.02 | 0.0236 | −1.92 | 0.3953 |
Enzyme Regulator Activity (3) | ||||||
1422477_at | Cables1 | Cdk5 and Abl enzyme substrate 1 | 1.57 | 0.0067 | 1.03 | 0.8213 |
1423062_at | Igfbp3 | insulin-like growth factor binding protein 3 | 2.05 | 0.0281 | −1.09 | 0.6077 |
1421138_a_at | Pkib | protein kinase inhibitor beta | −1.63 | 0.0356 | −1.16 | 0.2212 |
Transcription Regulator Activity (3) | ||||||
1445710_x_at | Duxbl | double homeobox B-like | 1.82 | 0.0010 | 1.19 | 0.4352 |
1417065_at | Egr1 | early growth response 1 | 1.99 | 0.0000 | 1.79 | 0.0004 |
1417930_at | Nab2 | Ngfi-A binding protein 2 | −2.40 | 0.0035 | −2.88 | 0.0001 |
Molecular Transducer Activity (4) | ||||||
1428538_s_at | Rarres2 | retinoic acid receptor responder (tazarotene induced) 2 | 1.52 | 0.0401 | −1.02 | 0.9101 |
1430295_at | Gna13 | guanine nucleotide binding protein, alpha 13 | 1.68 | 0.0012 | 1.08 | 0.4900 |
1434447_at | Met | met proto-oncogene | 1.69 | 0.0380 | −1.17 | 0.1753 |
1418552_at | Opn1sw | opsin 1 (cone pigments), short-wave-sensitive | −1.72 | 0.0000 | −1.40 | 0.0233 |
Transporter Activity (5) | ||||||
1424338_at | Slc6a13 | solute carrier family 6, member 13 | 1.66 | 0.0068 | −1.37 | 0.1628 |
1443823_s_at | Atp1a2 | ATPase, Na+/K+ transporting, alpha 2 polypeptide | 1.76 | 0.0136 | −1.09 | 0.6566 |
1438945_x_at | Gja1 | gap junction membrane channel protein alpha 1 | 1.83 | 0.0229 | −1.14 | 0.5575 |
1436044_at | Scn7a | sodium channel, voltage-gated, type VII, alpha | −1.59 | 0.0005 | −1.74 | 0.0000 |
1415844_at | Syt4 | synaptotagmin IV | −2.55 | 0.0000 | −2.26 | 0.0000 |
Catalytic Activity (20) | ||||||
1452839_at | Dph5 | DPH5 homolog (S. cerevisiae) | 1.51 | 0.0197 | 1.25 | 0.0094 |
1440926_at | Flt1 | FMS-like tyrosine kinase 1 | 1.56 | 0.0263 | −1.18 | 0.2562 |
1428987_at | Dynlrb2 | dynein light chain roadblock-type 2 | 1.62 | 0.0199 | 1.49 | 0.2117 |
1449623_at | Txnrd3 | thioredoxin reductase 3 | 1.64 | 0.0080 | 1.07 | 0.6259 |
1417024_at | Hars | histidyl-tRNA synthetase | 1.66 | 0.0000 | 1.66 | 0.0000 |
1440179_x_at | Ibrdc1 | IBR domain containing 1 | 1.70 | 0.0067 | −1.10 | 0.1262 |
1455385_at | Exoc6 | exocyst complex component 6 | 1.76 | 0.0093 | 1.09 | 0.6328 |
1454713_s_at | Hdc | histidine decarboxylase | 1.80 | 0.0150 | 1.21 | 0.0278 |
1449106_at | Gpx3 | glutathione peroxidase 3 | 1.93 | 0.0472 | −1.80 | 0.2441 |
1452975_at | Agxt2l1 | alanine-glyoxylate aminotransferase 2-like 1 | 2.29 | 0.0072 | −1.24 | 0.1606 |
1424325_at | Esco1 | establishment of cohesion 1 homolog 1 (S. cerevisiae) | −1.53 | 0.0239 | −1.22 | 0.1796 |
1430996_at | Etnk1 | ethanolamine kinase 1 | −1.53 | 0.0076 | −1.13 | 0.4668 |
1441486_at | Fkbp15 | FK506 binding protein 15 | −1.54 | 0.0040 | −1.38 | 0.1085 |
1434734_at | E130016E03Rik | RIKEN cDNA E130016E03 gene | −1.57 | 0.0446 | −1.00 | 0.9955 |
1458363_at | Zdhhc17 | zinc finger, DHHC domain containing 17 | −1.58 | 0.0012 | −1.25 | 0.0814 |
1440553_at | Mecr | mitochondrial trans-2-enoyl-CoA reductase | −1.58 | 0.0262 | −1.16 | 0.1769 |
1445632_at | Ogdh | oxoglutarate dehydrogenase (lipoamide) | −1.58 | 0.0050 | 1.09 | 0.6322 |
1440351_at | Birc4 | Baculoviral IAP repeat-containing 4 | −1.75 | 0.0283 | 1.02 | 0.8804 |
1457732_at | Pcmtd2 | Protein-L-isoaspartate O-methyltransferase domain containing 2 | −2.00 | 0.0016 | −1.01 | 0.9495 |
1439843_at | Camk4 | calcium/calmodulin-dependent protein kinase IV | −2.19 | 0.0000 | −1.95 | 0.0006 |
Binding (24) | ||||||
1438295_at | Glcci1 | Glucocorticoid induced transcript 1 | 1.50 | 0.0044 | 1.21 | 0.2239 |
1441317_x_at | Jakmip1 | janus kinase and microtubule interacting protein 1 | 1.50 | 0.0256 | 1.04 | 0.5407 |
1434203_at | Fam107a | Fam107a family with sequence similarity 107, member A | 1.52 | 0.0244 | −1.07 | 0.4713 |
1451602_at | Snx6 | sorting nexin 6 | 1.55 | 0.0456 | 1.06 | 0.6713 |
1428942_at | Mt2 | metallothionein 2 | 1.57 | 0.0008 | −1.30 | 0.0078 |
1435386_at | Vwf | Von Willebrand factor homolog | 1.60 | 0.0158 | 1.31 | 0.0166 |
1452217_at | Ahnak | AHNAK nucleoprotein (desmoyokin) | 1.61 | 0.0073 | −1.01 | 0.9348 |
1422660_at | LOC671237 | similar to Putative RNA-binding protein 3 | 1.62 | 0.0121 | −1.04 | 0.6603 |
1456351_at | Brd8 | bromodomain containing 8 | 1.67 | 0.0003 | 1.66 | 0.0005 |
1429239_a_at | Stard4 | StAR-related lipid transfer (START) domain containing 4 | 2.18 | 0.0020 | 1.79 | 0.0295 |
1417580_s_at | Selenbp1 | selenium binding protein 1 | 2.34 | 0.0102 | 1.23 | 0.0676 |
1451692_at | Tmco6 | transmembrane and coiled-coil domains 6 | 4.10 | 0.0000 | 2.73 | 0.0002 |
1422877_at | Pcdhb12 | protocadherin beta 12 | −1.52 | 0.0070 | −1.41 | 0.0010 |
1437694_at | BB114266 | Expressed sequence BB114266 | −1.53 | 0.0318 | −1.13 | 0.1606 |
1421132_at | Pvrl3 | poliovirus receptor-related 3 | −1.56 | 0.0153 | 1.02 | 0.7130 |
1436981_a_at | Ywhaz | tyrosine 3-monooxygenase activation protein, zeta | −1.56 | 0.0024 | −1.04 | 0.5712 |
1440632_at | Pcdhb4 | protocadherin beta 4 | −1.57 | 0.0446 | −1.58 | 0.0833 |
1449527_at | Pcdhb7 | protocadherin beta 7 | −1.58 | 0.0155 | −1.64 | 0.0016 |
1430569_at | Ttc9c | tetratricopeptide repeat domain 9C | −1.58 | 0.0089 | −1.02 | 0.8478 |
1443950_at | A630042L21Rik | RIKEN cDNA A630042L21 gene | −1.64 | 0.0345 | 1.33 | 0.0600 |
1421953_at | Crkl | v-crk sarcoma virus CT10 oncogene homolog (avian)-like | −1.66 | 0.0216 | 1.01 | 0.9614 |
1426458_at | Slmap | sarcolemma associated protein | −1.68 | 0.0164 | −1.39 | 0.1939 |
1443315_at | Dmd | Dystrophin | −2.45 | 0.0492 | 1.66 | 0.0103 |
1422640_at | Pcdhb9 | protocadherin beta 9 | −14.34 | 0.0000 | −17.48 | 0.0000 |
Unknown (8) | ||||||
1417460_at | Ifitm2 | interferon induced transmembrane protein 2 | 1.53 | 0.0478 | −1.03 | 0.7015 |
1417275_at | Mal | myelin and lymphocyte protein, T-cell differentiation protein | 1.59 | 0.0059 | 1.16 | 0.1316 |
1453632_at | 4930538K18Rik | RIKEN cDNA 4930538K18 gene | 1.61 | 0.0215 | 1.07 | 0.5032 |
1434817_s_at | Rprd2 | Regulation of nuclear pre-mRNA domain containing 2 | 1.75 | 0.0387 | 1.13 | 0.2222 |
1460049_s_at | 1500015O10Rik | RIKEN cDNA 1500015O10 gene | 1.77 | 0.0163 | 1.34 | 0.3090 |
1447553_x_at | Ric3 | Resistance to inhibitors of cholinesterase 3 homolog (C. elegans) | −1.56 | 0.0314 | 1.33 | 0.1653 |
1451634_at | 2810051F02Rik | RIKEN cDNA 2810051F02 gene | −1.63 | 0.0438 | 1.107 | 0.5203 |
1428909_at | A130040M12Rik | RIKEN cDNA A130040M12 gene | −1.90 | 0.0001 | −1.62 | 0.0368 |
Not Annotated (2) | ||||||
1441430_at | 1.56 | 0.0106 | −1.13 | 0.2617 | ||
1442733_at | −1.55 | 0.0244 | −1.05 | 0.7378 |