Molecular Vision: Asukata, Mol Vis 2009; 15:2673-2682. Table 1

Table 1. Allele frequencies of SNPs in the TLR4 gene.

dbSNP	Alleles	Position (bp)	Gene location	Minor allele frequency, n (%)			p (SUvs.SN)	p (SUvs.C)	p (SNvs.C)
dbSNP	Alleles	Position (bp)	Gene location	Sarcoid uveitis n=196	Sarcoid non-uveitis n=27	Controls n=206	p (SUvs.SN)	p (SUvs.C)	p (SNvs.C)
rs10759930	T>C	119,501,442	5'-UTR	142 (36.2)	22 (40.7)	157 (38.1)	0.319	0.387	0.542
rs1927914	A>G	119,504,546	5'-UTR	141 (36.0)	22 (40.7)	158 (38.3)	0.295	0.274	0.577
rs1927911	G>A	119,509,875	Intron	137 (34.9)	21 (38.9)	159 (38.6)	0.398	0.097	0.945
rs12377632	C>T	119,512,551	Intron	139 (35.5)	21 (38.9)	157 (38.1)	0.458	0.228	0.857
rs2149356	G>T	119,514,020	Intron	137 (34.9)	21 (38.9)	158 (38.3)	0.398	0.123	0.901
rs11536889	G>C	119,517,952	3'-UTR	93 (23.7)	12 (22.2)	108 (26.2)	0.769	0.318	0.435
rs7037117	A>G	119,523,484	3'-UTR	87 (22.2)	15 (27.8)	89 (21.6)	0.275	0.811	0.225
rs7045953	A>G	119,525,616	3'-UTR	31 ( 7.9)	3 ( 5.6)	39 (9.5)	0.431*	0.410	0.430*

In the table, SNP represents single-nucleotide polymorphism, TLR4 represents toll-like receptor 4, and bp represents base pairs. Position is the distance from the short arm telomere. Gene location is the location of the SNP within the genomic TLR4 sequence. P values were calculated with the χ² test using a 2×2 contingency table. In the table, SUvs.SN represents sarcoid uveitis versus sarcoid non-uveitis, SUvs.C represents sarcoid uveitis versus control, and SNvs.C represents sarcoid non-uveitis versus control. The asterisk indicates calculation using Fisher's Exact Test.