Molecular Vision: Suzuki, Mol Vis 2009; 15:2554-2569. Table 6

Table 6. Gene expression in human corneal epithelial cells: Significant, sex-related differences identified uniquely with either CodeLink or Affymetrix arrays.

Entrez gene identification	Gene	Ratio	p value	Ontology
CodeLink
Male>Female
4016	Lysyl oxidase-like 1	3.23	<0.0326	electron transport
11226	GalNAc-T6	2.19	<0.0082	protein amino acid O-linked glycosylation
4855	Notch homolog 4	2.04	<0.0070	cell fate determination
10686	Claudin 16	1.67	<0.0180	ion transport
*	Integrin subunit α-2 gene	1.65	<0.0347	cell adhesion
Female > Male
23762	Oxysterol binding protein 2	3.31	<0.0095	lipid transport
85865	GTP-binding protein 10 (putative)	2.76	<0.0095	ribosome biogenesis and assembly
5024	Purinergic receptor P2X, ligand-gated ion channel, 3	2.65	<0.0127	ion transport
5307	Paired-like homeodomain 1	2.24	<0.0363	regulation of transcription, DNA-dependent
10630	Podoplanin	1.88	<0.0332	cell morphogenesis
Affymetrix
Male>Female
29970	Schwannomin interacting protein 1	2.64	<0.0321	protein binding
23531	Monocyte to macrophage differentiation-associated	2.07	<0.0038	cytolysis
5723	Phosphoserine phosphatase	2.05	<0.0383	L-serine biosynthetic process
4791	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2	1.91	<0.0141	regulation of transcription, DNA-dependent
26227	Phosphoglycerate dehydrogenase	1.75	<0.0088	L-serine biosynthetic process
Female>Male
9630	Guanine nucleotide binding protein, α14	2.62	<0.0028	signal transduction
595	Cyclin D1	1.7	<0.0090	G1/S transition of mitotic cell cycle
8379	Mitotic arrest deficient-like 1	1.64	<0.0010	mitotic metaphase
3669	Interferon stimulated exonuclease	1.48	<0.0268	DNA catabolic process, exonucleolytic
10801	Septin 9	1.46	<0.0388	carbohydrate metabolic process

Genes expressed on the Codelink Bioarray were not present at above threshold sensitivity in the Affymetrix array. Similary, genes expressed on the Affymetrix array were not present at above threshold sensitivity on the CodeLink Bioarray. Abbreviations in the table are GalNAc-T6 = UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase. The asterisk indicates Gene accession number = AF113511.