Table 6 of Chen, Mol Vis 2009; 15:2349-2357.


Table 6. Risk alleles and MAF for the three SNPs of LOXL1 in different populations.


Population
rs1048661 (G/T) rs3825942 (G/A) rs2165241 (T/C)
Reference
Risk allele MAF Risk allele MAF Risk allele MAF
Iceland G 0.349 (T) G 0.153 (A) T 0.473 (T) [25]
Sweden G 0.318 (T) G 0.121 (A) T 0.465 (C)
Austria G 0.329 (T) G 0.183 (A) NA NA [36]
United States G 0.335 (T) G 0.156 (A) T 0.487 (T) [34]
United States G 0.297 (T) G 0.202 (A) T 0.448 (T) [32]
United States G 0.400 (T) G 0.120 (A) NA NA [33]
United States G 0.281 (T) G 0.205 (A) T 0.456 (T) [35]
Germany and Italy G 0.348 (T) G 0.149 (A) T 0.488 (T) [37]
Australia G NA G NA NA NA [31]
refSNP (European) NA 0.040 (T) NA 0.172 (T) NA 0.392 (T) NCBI Database
India * 0.270 (T) G 0.070 (A) NA NA [39]
Japan T 0.450 (G) G 0.147 (A) NA NA [41]
Japan T 0.497 (G) G 0.137 (A) C 0.102 (T) [43]
Japan T 0.460 (G) G 0.143 (A) NA NA [40]
Japan T NA G NA NA NA [45]
Japan T 0.493 (T) G 0.123 (A) NA NA [42]
Japan T 0.450 (T) G 0.194 (A) C 0.124 (T) [44]
Singapore (Chinese) * 0.444 (G) G 0.082 (A) NA NA [46]
China (Beijing) T 0.484 (G) G 0.104 (A) C 0.100 (T) present study
China





[52]
(Hongkong) NA 0.470 (G) NA 0.124 (A) NA 0.102 (T)
(Beijing) NA 0.497 (G) NA 0.135 (A) NA 0.084 (T)
refSNP             NCBI Database
Asian (China) NA NA NA 0.111(T) NA 0.067 (T)
Asian (Japan) NA 0.438 (G) NA 0.125 (T) NA 0.167 (T)