Table 6 of Chen, Mol Vis 2009; 15:2349-2357. Table 6 of Chen, Mol Vis 2009; 15:2349-2357.
Table 6. Risk alleles and MAF for the three SNPs of LOXL1 in different populations.
Population |
rs1048661 (G/T) | rs3825942 (G/A) | rs2165241 (T/C) | Reference |
|||
|---|---|---|---|---|---|---|---|
| Risk allele | MAF | Risk allele | MAF | Risk allele | MAF | ||
| Iceland | G | 0.349 (T) | G | 0.153 (A) | T | 0.473 (T) | [25] |
| Sweden | G | 0.318 (T) | G | 0.121 (A) | T | 0.465 (C) | |
| Austria | G | 0.329 (T) | G | 0.183 (A) | NA | NA | [36] |
| United States | G | 0.335 (T) | G | 0.156 (A) | T | 0.487 (T) | [34] |
| United States | G | 0.297 (T) | G | 0.202 (A) | T | 0.448 (T) | [32] |
| United States | G | 0.400 (T) | G | 0.120 (A) | NA | NA | [33] |
| United States | G | 0.281 (T) | G | 0.205 (A) | T | 0.456 (T) | [35] |
| Germany and Italy | G | 0.348 (T) | G | 0.149 (A) | T | 0.488 (T) | [37] |
| Australia | G | NA | G | NA | NA | NA | [31] |
| refSNP (European) | NA | 0.040 (T) | NA | 0.172 (T) | NA | 0.392 (T) | NCBI Database |
| India | * | 0.270 (T) | G | 0.070 (A) | NA | NA | [39] |
| Japan | T | 0.450 (G) | G | 0.147 (A) | NA | NA | [41] |
| Japan | T | 0.497 (G) | G | 0.137 (A) | C | 0.102 (T) | [43] |
| Japan | T | 0.460 (G) | G | 0.143 (A) | NA | NA | [40] |
| Japan | T | NA | G | NA | NA | NA | [45] |
| Japan | T | 0.493 (T) | G | 0.123 (A) | NA | NA | [42] |
| Japan | T | 0.450 (T) | G | 0.194 (A) | C | 0.124 (T) | [44] |
| Singapore (Chinese) | * | 0.444 (G) | G | 0.082 (A) | NA | NA | [46] |
| China (Beijing) | T | 0.484 (G) | G | 0.104 (A) | C | 0.100 (T) | present study |
| China | [52] | ||||||
| (Hongkong) | NA | 0.470 (G) | NA | 0.124 (A) | NA | 0.102 (T) | |
| (Beijing) | NA | 0.497 (G) | NA | 0.135 (A) | NA | 0.084 (T) | |
| refSNP | NCBI Database | ||||||
| Asian (China) | NA | NA | NA | 0.111(T) | NA | 0.067 (T) | |
| Asian (Japan) | NA | 0.438 (G) | NA | 0.125 (T) | NA | 0.167 (T) | |