Table 2 of Miyadera, Mol Vis 2009; 15:2287-2305. Table 2 of Miyadera, Mol Vis 2009; 15:2287-2305.
Table 2. PCR primers for insertion screening and marker genotyping.
Feature |
Sequence type |
CFA15 location (Mb) |
Forward primer (5′>3′) |
Reverse primer (5′>3′) |
Reference |
|---|---|---|---|---|---|
| RPGRIP1_insertion* | Gene | 21.34 | CTTAAGGAGAACACAAGGTAC | GAAGAGCACATGTTGGTGAAGG | [19] |
| CAMC15.001 | Microsatellite | 16.74 | TTCGCTTCCTCCCTCACATG | TGAGCTGCAGACAAAGGCC | - |
| CAMC15.036 | Microsatellite | 17.32 | CCTGTGTGGCAGCAGTTGAAT | ACATTGGGTTCCGCATTCAGT | - |
| CAMC15.037 | Microsatellite | 18.13 | TTTCCAACCTCCCTCCAACC | TGGCGCGGTGGTTTAGCAT | - |
| CAMC15.038 | Microsatellite | 18.76 | GCTACATGTCAGGCGTTGTGT | TCCTCGTCTCTACAGTGGGCT | - |
| CAMC15.006 | Microsatellite | 19.48 | CCCGCACCACATGCTCTC | AGCTACGTCAGCTTCTCTAC | - |
| CAMC15.039 | Microsatellite | 19.87 | AACGCTTAGCTTGCTTCCACG | CATCATCGGGGAAACCCAAGT | - |
| CAMC15.040 | Microsatellite | 20.39 | ATGGTGGTAATCACGGTGCAA | TCCCCCATTATTGGATGGCCT | - |
| CAMC15.009 | Microsatellite | 20.9 | TGGCTCAGCGGTTTATTGCC | ACTTCTGCTGGTTGGACAGG | - |
| CAMC15.041 | Microsatellite | 21.05 | CAGGTGTGAGTTGTGGGTCTT | AGCTGTTCTGTGGGGTGCTA | - |
| RPGRIP1_intron 2 | Gene | 21.34 | CCTTGTGTTCTCCTTAAGTC | TGAGCTTTGTTTGCCTTTGG | - |
| CAMC15.029 | Microsatellite | 21.56 | GCCTGGCTAGCTCAGTTGA | AACCCAAAGCTGGGCTTAATC | - |
| CAMC15.034 | Microsatellite | 21.89 | CATGTGCTTCCCAGTCCTTT | ATAGATGGGGTGCCTGAGTG | - |
| CAMC15.030 | Microsatellite | 22.2 | AAAGGAGGCCCGGATATTTAT | TGAGCACCCCTTTACCATTC | - |
| CAMC15.035 | Microsatellite | 22.24 | GAAAAGGAGTACCGCCACC | GCTTGGGGGAAGAAACCTAC | - |
| CAMC15.031 | Microsatellite | 22.79 | CAGCCAATTGTGGCTAGTGA | TGCCCCAATCTACCTTTCTG | - |
| CAMC15.013 | Microsatellite | 23.28 | AATGAGTCCTACATCAGGCTC | GGACTCCATGTCAAGGGTTG | - |
| CAMC15.032 | Microsatellite | 23.95 | TTCTCCCTCTGCCTGTGTC | TCCTGAGTGCTAGGCAGTTT | - |
| CAMC15.033 | Microsatellite | 24.45 | TCAAGACCCTCAAAGGCATAA | GCACCCCGATGTTTATTGTC | - |
| CAMC15.016 | Microsatellite | 25.1 | TGCTGATTAGGCTGCTCAAG | AAACCAGCTGCTTGGGACAC | - |
| CAMC15.019 | Microsatellite | 26.24 | TCTCCTTTGACCCAAATTCCC | AGCACTCAGGTTCAAGAGCC | - |
| CAMC15.023 | Microsatellite | 28.35 | TGTCTCCTGAGGCATGGGA | TCAGGTCCTCTCCCCATTTT | - |
| FH3813 | Microsatellite | 28.91 | GATAGAGCTCCGTATCATGCTC | TCTTTGATCAACTACCTCATGG | [46] |
| CAMC15.027 | Microsatellite | 30.25 | TGAACATAGGGGAAGGGAGG | TCCCCTCCAGCAGTATGCA | - |