Table 3 of
Shimauchi-Matsukawa, Mol Vis 2008; 14:358-369.
Table 3. Identified cone genes
GI | Identification [gene symbol] | Sp | Length (bases) | Lowest Expected value | Start - End (position of a base) | Signal Intensity | Frq | ISH |
---|---|---|---|---|---|---|---|---|
Other genes | ||||||||
37589638 | N-myc downstream regulated gene 1, like [ndrg1l] | Dr | 1712 | 0.E+00 | 55 - 733 | 5.3 | 4 | c1 |
18858260 | Aryl hydrocarbon receptor 2 [ahr2] | Dr | 7126 | 4.E-30 | 5574 - 5680 | 2.3 | 4 | c2 |
46249950 | zgc:85611/Acyl-coemzyme A binding domain containing [zgc:85611] | Dr | 1745 | 6.E-48 | 442 - 630 | 2.5 | 1 | c3 |
42542723 | 14-3-3 theta polypeptide/ ywhaq [ywhaq] | Dr | 1943 | 1.E-87 | 1055 - 1467 | 1.5 | 1 | c4 |
28279778 | SET translocation (myeloid leukemia-associated) A [seta] | Dr | 1715 | 0.E+00 | 315 - 847 | 3.1 | 1 | c5 |
62132940 | wu:fa20e05/ Spectrin alpha chain, brain [wu:fa20e05] | Dr | 1795 | 0.E+00 | 761 - 1186 | 5.1 | 1 | c6 |
68360189 | Similar to Kruppel-like factor 9 [LOC565869] | Dr | 987 | 3.E-73 | 739 - 985 | 3.0 | 1 | c7 |
34784092 | Opposite strand transcription unit to Stag3 [gats] | Dr | 2295 | 4.E-27 | 2005 - 2113 | 5.7 | 1 | c8 |
28278872 | Cyclin L1 [ccnl1] | Dr | 1967 | 5.E-10 | 1489- 573 | 5.3 | 1 | c9 |
39645455 | Prosaposin [psap] | Dr | 2390 | 4.E-73 | 999 - 1329 | 2.1 | 1 | |
19068029 | Growth hormone protein gene [gh] | Cal | 11576 | 2.E-16 | 3370 - 3453 | 12.1 | 1 | |
39645429 | Poly A binding protein, cytoplasmic 1 b [pabpc1b] | Dr | 2794 | 5.E-111 | 1043 - 1416 | 3.2 | 1 | |
Housekeeping genes | ||||||||
55071759 | ATPase 6 gene [mt-atp6] | Cc | 668 | 8.E-99 | 87 - 271 | 3.0 | 3 | |
85720010 | Eukaryotic translation initiation factor 5 [eif5] | Ip | 759 | 1.E-75 | 197 - 599 | 1.7 | 1 | |
Hit with genomic sequence | ||||||||
111153896 | Zebrafish DNA sequence from clone DKEYP-10C7 in linkage group 23 | Dr | 171155 | 1.E-14 | 20126 - 20236 | 3.2 | 1 | |
52421057 | Zebrafish DNA sequence from clone DKEY-19E4 in linkage group 6 | Dr | 209866 | 1.E-20 | 200719 - 200809 | 3.0 | 1 |