Table 2 of Fan, Mol Vis 2008; 14:2484-2491.
Gene | SNP | Minor allele |
Minor allele frequency | p value* | |||||
---|---|---|---|---|---|---|---|---|---|
PXFS | PXFG | PXFNG | Controls | PXFS | PXFG | PXFNG | |||
MTHFR | rs1801131 | C | 0.348 | 0.368 | 0.295 | 0.370 | 0.79 | 1.00 | 0.45 |
MTHFR | rs1801133 | T | 0.363 | 0.369 | 0.348 | 0.360 | 1.00 | 1.00 | 1.00 |
MTHFR | rs17037396 | T | 0.087 | 0.110 | 0.037 | 0.094 | 0.85 | 0.70 | 0.26 |
MTR | rs12096955 | T | 0.400 | 0.407 | 0.385 | 0.346 | 0.32 | 0.33 | 0.62 |
MTR | rs2229274 | A | 0.018 | 0.016 | 0.023 | 0.035 | 0.45 | 0.43 | 1.00 |
MTR | rs1805087 | G | 0.188 | 0.203 | 0.141 | 0.212 | 0.47 | 0.83 | 0.16 |
MTRR | rs326122 | G | 0.196 | 0.190 | 0.212 | 0.180 | 0.78 | 0.88 | 0.69 |
MTRR | rs1532268 | T | 0.315 | 0.328 | 0.283 | 0.435 | 0.053 | 0.10 | 0.10 |
MTRR | rs161870 | A | 0.477 | 0.468 | 0.500 | 0.488 | 0.89 | 0.88 | 1.00 |
MTRR | rs162036 | A | 0.161 | 0.175 | 0.130 | 0.143 | 0.66 | 0.52 | 1.00 |
MTHFD1 | rs8006686 | C | 0.213 | 0.225 | 0.185 | 0.115 | 0.015 | 0.015 | 0.25 |
MTHFD1 | rs2236225 | T | 0.453 | 0.434 | 0.489 | 0.479 | 0.56 | 0.33 | 0.62 |
MTHFD1 | rs11627387 | G | 0.271 | 0.272 | 0.269 | 0.267 | 1.00 | 1.00 | 1.00 |
CBS | rs2124459 | C | 0.426 | 0.401 | 0.471 | 0.374 | 0.33 | 0.65 | 0.13 |
CBS | rs1801181 | T | 0.338 | 0.328 | 0.369 | 0.335 | 1.00 | 0.92 | 0.59 |
CBS | rs5742905 | C | 0.092 | 0.098 | 0.076 | 0.065 | 0.28 | 0.25 | 0.81 |
CBS | rs234715 | G | 0.210 | 0.218 | 0.176 | 0.225 | 0.80 | 1.00 | 0.65 |