Figure 5. Schematic representation of the
Cdh23
gene structure and splice variants. Isoform a of
Cdh23 is the
full-length transcript and contains 69 coding (black) and noncoding
(gray) exons [
18].
Isoforms b and c were previously reported [
29]. Exon 68 encodes part of the cytoplasmic
domain of cadherin 23 and is alternatively spliced. Two alternatively
splice variants of isoform a, involving exons 5–10 (GenBank
EU681829
and
EU681830)
of
Cdh23 were amplified from inner ear and retina cDNA using
PCR primers located in the sequence of exons 5 and 13.
Cdh23v-6J
is a nonsense mutation found in exon 9, which is absent in one of the
alternative splice variants of
Cdh23 isoform a.