Appendix 30 of Pratt, Mol Vis 2008; 14:1414-1428.


Appendix 30: Criteria table for transcription response element inclusion in gene promoter region regulatory network models.

To access the data, click or select the words “Appendix 30.” This will initiate the download of a pdf archive that contains the file. Represented for each TRE identified in the promoter regions of each gene are the TRANSFAC identifier name, the p-value, the ECF (evolutionary conservation factor), and the FR (frequency ratio) as defined in Methods. TREs included in this table are those with p-value <0.1, ECF =2, and FR >3.