Table 1 of Cheng, Mol Vis 2008; 14:1401-1413.

Table 1. Transcripts that were upregulated in deprived magnocellular layers as compared with non-deprived layers

Affymatrix ID RefSeq Gene Symbol Transcripts Fold Change
MmugDNA.2791.1.S1_at NM_002581 PAPPA pregnancy-associated plasma protein A, pappalysin 1 9.1
MmuSTS.1876.1.S1_at NM_080803 COL13A1 collagen, type XIII, alpha 1 8.3
MmuSTS.3434.1.S1_at NM_170696 ALDH1A2 aldehyde dehydrogenase 1 family, member A2 5.4
MmugDNA.7497.1.S1_at NM_213609 FAM19A1 family with sequence similarity 19, member A1 4.6
MmugDNA.27876.1.S1_at NM_002581 PAPPA pregnancy-associated plasma protein A, pappalysin 1 4.2
MmuSTS.3785.1.S1_at AY436323 AGT angiotensinogen (serine/cysteine) proteinase inhibitor 4.2
MmugDNA.18346.1.S1_at NM_198541 IGFL1 insulin growth factor-like family member 1 3.9
MmugDNA.22116.1.S1_at NM_006183 NTS neurotensin 3.8
MmugDNA.13685.1.S1_at     unknown 3.7
MmuSTS.3385.1.S1_at NM_181523 PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 3.7
MmugDNA.35490.1.S1_at NM_006328 RBM14 RNA binding motif protein 14 3.3
MmugDNA.14651.1.S1_at NM_004904 CREB5 cAMP responsive element binding protein 5 3.2
MmugDNA.37283.1.S1_at NM_021190 PTBP2 Polypyrimidine tract binding protein 2 3.1
MmugDNA.17471.1.S1_at NM_024749 FLJ12505 Hypothetical protein FLJ12505 3.0
MmugDNA.38329.1.S1_at NM_032160 C18orf4 chromosome 18 open reading frame 4 3.0
MmugDNA.37023.1.S1_at NM_006147 IRF6 interferon regulatory factor 6 2.8
MmugDNA.38004.1.S1_at     Transcribed locus 2.7
MmugDNA.29288.1.S1_at NM_015393   unknown 2.5
MmugDNA.37083.1.S1_at NM_145753 PHLDB2 pleckstrin homology-like domain, family B, member 2 2.5
MmugDNA.6639.1.S1_at     Transcribed locus 2.4
MmugDNA.22537.1.S1_s_at NM_002291 LAMB1 laminin, beta 1 2.2
MmuSTS.3615.1.S1_at NM_001266 CES1 carboxylesterase 1 2.1
MmugDNA.42270.1.S1_at NM_013372 GREM1 gremlin 1, cysteine knot superfamily 2.0
MmugDNA.9692.1.S1_at     unknown 2.0
MmugDNA.15114.1.S1_at NM_001812 CENPC1 centromere protein C 1 1.9
MmugDNA.32812.1.S1_at NM_006108 SPON1 spondin 1, extracellular matrix protein 1.9
MmugDNA.6252.1.S1_s_at NM_001670 ARVCF armadillo repeat gene deletes in velocardiofacial syndrome 1.9
MmuSTS.3940.1.S1_at NM_007269 STXBP3 syntaxin binding protein 3 1.9
MmugDNA.39862.1.S1_at NM_001280 CIRBP cold inducible RNA binding protein 1.8
MmugDNA.8458.1.S1_at NM_000527 LDLR low density lipoprotein receptor 1.8
MmugDNA.34471.1.S1_at NM_025154 UNC84A unc-84 homolog A (C. elegans) 1.7
MmugDNA.39414.1.S1_at NM_002130 HMGCS1 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 1.7