Table 4 of Rao, Mol Vis 2008; 14:1254-1262.


Table 4. The estimated haplotype frequencies and their odds ratios based on two SNPs (rs1048661 and rs3825942) across different secondary glaucoma phenotypes in the present cohort and other populations.

Populations, [n (cases, controls)] Pheno-types
G-G haplotype
T-G haplotype
Reference

% Cases % Controls OR (95%CI)* p value
%Cases %Controls OR (95%CI)* p value
Sweden [399,198] XFG
83.3 56.1 35.72# 2.2x10−16
16.2 31.8 12.36# 1.6x10−6
[9]
Iceland [195,14474] XFG
81.4 49.8 18.94# 3.3x10−12
17.3 34.9 5.74# 0.0027
[9]
USA [72,75] XFS
80.6 48 14.50 (3.27–64.35) 2.7x10−5
18.1 40 3.90 (0.84–18.04) 0.12
[10]
American and European [566,658] XFS
80.2 50.3 4.00 (3.10–5.18) 1.5x10−7
15.7 29.6 0.44 (0.33–0.59) 9.0x10−9
[13]
Germany and Italy [726,418] XFS/XFG
78.6 50.7 3.58 (2.98–4.32) 5.2x10−43
17.9 34.6 NA NA
[14]
Europe [167,170] XFG
83.5 48.8 52.1 (13.85–195.6) NA
15.9 32.9 14.67 (3.81–56.2) NA
[18]
India [52,97] XFS/XFG
64 37 5.74 (2.53–12.98) 9.9x10−6
27 36 2.55 (1.07–6.05) 0.129
[15]
Australia [86,2422] XFS
74 51 2.71 (1.91–3.92) 3.8x10−9
22 34 0.54 (0.36–0.78) 7.8x10−4
[17]
USA [78, 108] PG/PDS
52.9 55.3 1.08 (0.59–1.97) 0.643
32.3 26.9 1.35 (0.70–2.60) 0.266
Present study