Table 2 of Kane, Mol Vis 2008; 14:1138-1148.
Table 2 of Kane, Mol Vis 2008; 14:1138-1148.
Table 2. Differential gene expression in human retinal pericytes exposed to hypoxia.
| Number | Accession number | Description | SLR |
| Upregulated genes | |||
| 1 | NM_000076.1 | cyclin-dependent kinase inhibitor 1C (p57, Kip2, CDKN1C) | 1.7 |
| 2 | NM_000963.1 | prostaglandin-endoperoxide synthase 2 (prostaglandin GH synthase and cyclooxygenase, PTGS2) | 1.43 |
| 3 | NM_013332.1 | hypoxia-inducible protein 2 (HIG2) | 1.43 |
| 4 | BC005254.1 | Similar to C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 2 (activation-induced), clone MGC:12289 | 1.4 |
| 5 | NM_016109 | PPAR(gamma) angiopoietin related protein (PGAR) | 1.36 |
| 6 | AF064238.3 | smoothelin large isoform L2 (SMTN) | 1.26 |
| 7 | AF022375.1 | vascular endothelial growth factor | 1.26 |
| 8 | NM_014883.1 | KIAA0914 gene product (KIAA0914) | 1.16 |
| 9 | NM_015675.1 | growth arrest and DNA-damage-inducible, beta (GADD45B) | 1.13 |
| 10 | NM_002166.1 | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein (ID2) | 1.06 |
| 11 | NM_017606.1 | hypothetical protein DKFZp434K1210 (DKFZp434K1210) | 1.06 |
| 12 | BC005127.1 | adipose differentiation-related protein, clone MGC:10598 | 1.03 |
| 13 | NM_020142.1 | NADH:ubiquinone oxidoreductase MLRQ subunit homolog (LOC56901) | 1.03 |
| 14 | NM_003734.2 | amine oxidase, copper containing 3 (vascular adhesion protein 1, AOC3) | 1 |
| 15 | NM_006931.1 | solute carrier family 2 (facilitated glucose transporter), member 3 (SLC2A3) | 0.96 |
| 16 | S73751.1 | acyl CoA:cholesterol acyltransferase | 0.93 |
| 17 | AL048423.1 | EST: integrin, beta 5 | 0.9 |
| 18 | NM_003897.1 | immediate early response 3 (IER3) | 0.9 |
| 19 | NM_005195.1 | CCAATenhancer binding protein (CEBP), delta (CEBPD) | 0.9 |
| 20 | AL049176 | DNA sequence from clone 141H5 on chromosome Xq22.1–23. Contains parts of a novel Chordin LIKE protein with von Willebrand factor type C domains. | 0.9 |
| 21 | NM_020639.1 | ankyrin repeat domain 3 (ANKRD3) | 0.9 |
| 22 | NM_002912.1 | REV3 (yeast homolog)-like, catalytic subunit of DNA polymerase zeta (REV3L) | 0.83 |
| 23 | NM_000954.1 | prostaglandin D2 synthase (21kD, brain; PTGDS) | 0.83 |
| 24 | BC000125.1 | Similar to transforming growth factor, beta 1, clone MGC:3119 | 0.76 |
| 25 | AI078167 | EST: nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha | 0.76 |
| 26 | NM_005384.1 | nuclear factor, interleukin 3 regulated (NFIL3) | 0.76 |
| 27 | NM_019058.1 | hypothetical protein (FLJ20500), mRNA. RTP801 | 0.73 |
| 28 | NM_003670.1 | basic helix-loop-helix domain containing, class B, 2 (BHLHB2) | 0.66 |
| Downregulated genes | |||
| 1 | NM_000903.1 | diaphorase (NADHNADPH, cytochrome b-5 reductase, DIA4) | -2.16 |
| 2 | NM_003234.1 | transferrin receptor (p90, CD71, TFRC) | -1.53 |
| 3 | NM_020299.1 | aldo-keto reductase family 1, member B10 (AKR1B10) | -1.53 |
| 4 | NM_018092.1 | neuropilin (NRP) and tolloid (TLL)-like 2 (NETO2) | -1.23 |
| 5 | M21692.1 | class I alcohol dehydrogenase (ADH2) beta-1 subunit | -1 |
| 6 | D45421.1 | mRNA for phosphodiesterase I alpha | -0.86 |
| 7 | AK021882.1 | cDNA FLJ11820 fis, clone HEMBA1006445, highly similar to putative tumor supressor NOEY2 | -0.76 |