Table 1 of Roger, Mol Vis 2007; 13:206-219.


Table 1. Primer sets against rat sequence corresponding to cDNAs identified by subtraction suppressive hybridization

Clone denotes the cDNA number in the library, and rat sequence represents forward and reverse primer pairs corresponding to the cDNA. The primers were used to detect gene expression from mRNA extracted from retinal explants or RNA from neonatal rats. DC6 indicates down-regulated by CNTF after 6DIV, UC6 indicates up-regulated by CNTF after 6DIV.

              UC6 Library                          DC6 Library
        -------------------------            --------------------------
Clone      Rat sequence (5'-3')     Clone        Rat sequence (5'-3')
-----   -------------------------   ------   --------------------------
9H      F: CTCAATGCCGGCTTCAAAGAG    F5       F: CAGCAGTGACCACCAACTGTC
        R: CGAAGTTCTGCCTGGTAAACG             R: ATCAAACCAAAACCCTTAGGGG
6H      F: GACTCAGAGATGTAAGATCCC    G4       F: TCTTGTATGAGGACTCCGTGC
        R: TGTGCAGAGCTCTCTTCAGAC             R: GGTACAAGAGCCAGCAGCATA
4F      F: ACCCACTAAGCCTCCATTGG     E2       F: CAGAGTCTCCTTTGCCTGAG
        R: GGTCCTGGAATGAAGCCATG              R: GGTATGGATCCAACCCACTG
2G      F: TTCCAGCTTGAAAGCCCAGCC    D2       F: CAAGAGGGCCATCTGTACCA
        R: TGACTCCGGGCTTGTGCGTAA             R: TTCAGGCACGGATGCAGATG
10A     F: GGCGCCTGCGATTAGTGCTACA   A7       F: GGCAGAGGGCGCTTTAATTTC
        R: TGATCCTGCCCAGGCCAAAGA             R: AGTGTCAAGTTCTGCTCCCTG
                                    F2       F: ATCAATTATGAAAGTTTACTGCC
                                             R: GCTTTTCTTGGATTCATTTGTC
                                    D1       F: ATGCCTCCATGTGTAGTGCGG
                                             R: TTTTGGTTGGTTTGCCTAAAA
                                    C2       F: GAGATGTACTACTGCTCCAAGTG
                                             R: GTGGTTTATGCTGGCAAAGAG
                                    B6       F: ATGGAGATGAAGAAGAAGATTAAC
                                             R: TGTCACTAAGTTCCAACTTCCG
                                    B2       F: TGAATTTGGCTCAGGAGCTGC
                                             R: ACTCAGTGAGTCACAGGAGGA
                                    G7       F: CTGTGGGCTTACAGAGCCAAA
                                             R: ATGGCTGCTTCCCTCTATAGT
                                    C7       F: AGGAAGGAAGAGCCTCGTCGT
                                             R: AGGGTTGCTGCACTGTTACTA
                                    A2       F: TCCCCTGAACCTGAATGCCTGG
                                             R: CTCAGCAGACTGCCCGAGGAA
                                    S26      F: AAGTTTGTCATTCGGAACATT
                                             R: GATCGATTCCTGACAACCTTG

Roger, Mol Vis 2007; 13:206-219 <http://www.molvis.org/molvis/v13/a24/>
©2007 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535