Table 1 of Takacs, Mol Vis 2007; 13:1976-1983.


Table 1. Primers used for sequencing exons of TGFBI

Primers have been optimized for PCR amplification of the 17 exons of TGFBI from genomic DNA. In addition to entire exons, short segments of their flanking introns were also covered. Exon 17 was sequenced in three overlapping segments.

                                             Annealing     product
                                             temperature   length
Exon    primer            Sequence              (°C)        (bp)
----   --------   ------------------------   -----------   -------
1      forward:   5-CCCTCCCGCTCGCAGCTTAC-3       55          424
       reverse:   5-CCCTCTCTCCTTCCACCGCG-3
2      forward:   5-GACCCAAGGAGGCAAACACG-3       55          232
       reverse:   5-CCAGCGTGCATACAGCTTGG-3
3      forward:   5-CTCTTCCTTGGCTGTGGAGG-3       55          228
       reverse:   5-TCCTCTCTCCCACCATTCCC-3
4      forward:   5-CCCCAGAGGCCATCCCTCCT-3       58          226
       reverse:   5-CCGGGCAGACGGAGGTCATC-3
5      forward:   5-TCACGAGGGCTGAGAACATG-3       55          341
       reverse:   5-CAGAAACCAGCCCACACATG-3
6      forward:   5-GCTTTGGGACTATGCCTCTG-3       58          260
       reverse:   5-CTCTTGGGAGGCAATGTGTC-3
7      forward:   5-GAGCTTGGGTTTGGCTTCTG-3       55          350
       reverse:   5-AGCAGGTCTTGGGCTCAATC-3
8      forward:   5-GCTGCAAGTGGTCCCTGAGG-3       60          407
       reverse:   5-AGCTGTGAGCTGGGTCCAGG-3
9      forward:   5-TGCTGATGTGTGTCATGCCC-3       55          426
       reverse:   5-CCCAAAGGCATTCTCTGCAC-3
10     forward:   5-CCAAACTCAAGGAGGGATGG-3       58          373
       reverse:   5-CCTTCCTTGTCAGCAACCAG-3
11     forward:   5-CTGAACAAATCAGGAGGCCC-3       55          288
       reverse:   5-CTTGACAAATAGCTGGGGCC-3
12     forward:   5-TGTGCATTCCAGTGGCCTGG-3       55          339
       reverse:   5-GCCAACTGTTTGCTGCTGGG-3
13     forward:   5-GTGCTTATTCCCTGGGCAGG-3       55          317
       reverse:   5-ATATGTCCTGGAGCCCTGCC-3
14     forward:   5-TCGAGATCATGCCACTGCAC-3       55          344
       reverse:   5-TCTCCACCAACTGCCACATG-3
15     forward:   5-AGCCAGAAAGCCCACCAGTG-3       58          275
       reverse:   5-AGCAGCCAAGGAAGACAGGG-3
16     forward:   5-TCTGCCAAGGCCACCTGAGG-3       58          278
       reverse:   5-CAGCAGATGGCAGGCTTGGG-3
17/A   forward:   5-AGAGCATGGCAGAAGGAGGC-3       55          306
       reverse:   5-CCCACATGCACAAGGCTCAC-3
17/B   forward:   5-TACAGGAGGAATGCACCACG-3       55          376
       reverse:   5-AAACTGTGCCAGGACTTCCC-3
17/C   forward:   5-GACTGCCTATGCCAAGTCCC-3       58          364
       reverse:   5-AGGTGTGGAGGAGCATGACG-3

Takacs, Mol Vis 2007; 13:1976-1983 <http://www.molvis.org/molvis/v13/a223/>
©2007 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535