Table 9 of
Medvedovic, Mol Vis 2006;
12:422-440.
Table 9.
Gene ontology (GO) categories of the gene cluster displaying a weak decrease in relative mRNA levels early during lens regeneration compared to intact control lens.
Number of genes False in the discovery Main GO category category Gene category rate ------------------ -------- ------------------------------------------- --------- Biological Process 16 Macromolecule biosynthesis 2.9E-03 17 Biosynthesis 5.3E-03 12 Protein biosynthesis 6.1E-03 2 RNA elongation 2.8E-02 3 Purine ribonucleoside triphosphate 5.3E-02 biosynthesis 3 Purine nucleoside triphosphate biosynthesis 5.3E-02 3 Ribonucleoside triphosphate biosynthesis 5.3E-02 7 Perception of abiotic stimulus 5.3E-02 7 Sensory perception 5.3E-02 3 Purine ribonucleoside triphosphate 5.3E-02 metabolism 3 Ribonucleoside triphosphate metabolism 5.3E-02 3 Nucleoside triphosphate biosynthesis 5.3E-02 5 Perception of chemical substance 5.3E-02 5 Chemosensory perception 5.3E-02 3 Purine nucleoside triphosphate metabolism 5.3E-02 14 G-protein coupled receptor protein 5.8E-02 signaling pathway 7 Perception of external stimulus 5.8E-02 3 Purine ribonucleotide biosynthesis 5.8E-02 3 Nucleoside triphosphate metabolism 5.8E-02 3 Purine nucleotide biosynthesis 6.9E-02 3 Ribonucleotide biosynthesis 7.1E-02 2 Phosphoenolpyruvate-dependent sugar 7.6E-02 phosphotransferase system 3 Purine ribonucleotide metabolism 7.6E-02 3 Purine nucleotide metabolism 7.8E-02 3 Ribonucleotide metabolism 7.8E-02 2 Oxidative phosphorylation 8.7E-02 2 ATP biosynthesis 9.8E-02 2 Nucleoside phosphate metabolism 9.8E-02 Cellular Component 10 Ribosome 2.0E-03 12 Ribonucleoprotein complex 2.0E-03 14 Mitochondrion 1.2E-02 3 Small ribosomal subunit 5.3E-02 2 Transport vesicle 5.3E-02 3 Organellar ribosome 5.8E-02 3 Mitochondrial ribosome 5.8E-02 3 Mitochondrial matrix 9.8E-02 2 Mitochondrial large ribosomal subunit 9.9E-02 2 Organellar large ribosomal subunit 9.9E-02 Molecular Function 10 Structural constituent of ribosome 1.1E-03 13 Structural molecule activity 1.7E-02 10 RNA binding 2.2E-02 4 Hydrogen ion transporter activity 7.8E-02 4 Monovalent inorganic cation transporter 7.8E-02 activity 2 Oxidoreductase activity, acting on heme 7.8E-02 group of donors, oxygen as acceptor 2 Cytochrome-c oxidase activity 7.8E-02 2 Oxidoreductase activity, acting on heme 7.8E-02 group of donors 2 Heme-copper terminal oxidase activity 7.8E-02 2 DNA dependent ATPase activity 8.1E-02 2 Damaged DNA binding 9.7E-02 |