Table 1 of Ramirez-Miranda, Mol Vis 2006; 12:318-323.


Table 1. Oligonucleotides used for PAX6 amplification

Sequence of oligonucleotides and annealing temperatures used for exon-by-exon PAX6 amplification, modified from [11]. In the table, "F" indicates the forward strand and "R" indicates the reverse strand.

                                     Annealing
                                    temperature
Exon            Sequence               (°C)
----   --------------------------   -----------
 3     F: TCAGAGAGCCATGGAGGTAT          55
 3     R: CTGTTTGTGGGGTTTTGAGCC         55
 4     F: TTGGGAGTTCAGGCCTACCT          55
 4     R: GAAGTCCCAGAAAGACCAGA          55
 5     F: CCTCTTCACTCTGCTCTCTT          55
 5     R: ATGAAGAGAGGGCGTTGAGA          55
 5a    F: TGAAAGTATCATCATATTTGTAG       60
 5a    R: GGGAAGTGGACACAAAACCA          60
 6     F: GTGGTTTTCTGCCACTTCC           55
 6     R: AGGAGAGAGCATTGGGCTTA          55
 7     F: GAGCTGAGATGGGTGACTGTG         51
 7     R: AGCATGGAAGCCCTGAGAGGA         51
 8     F: GGGAATGTTTTGGTGAGGCT          55
 8     R: CAAAGGGCCCTGGCTAAATT          55
 9     F: GTAGTTCTGGCACAATATGG          55
 9     R: GTACTCTGTACAAGCACCTC          55
10     F: GTAGACACAGTGCTAACCTG          55
10     R: CCCGGAGCAAACAGGTTTAA          55
11     F: TTAAACCTGTTTGCTCCGGG          55
11     R: TTATGCAGGCCACCACCAGC          55
12     F: CTGAAGCGGCTCTAACAGCCA         60
12     R: TAATGATCAGACTTGTTGGCA         60
13     F: CATGTCTGTTTCTCAAAGGGA         60
13     R: GAACAATTAACTTTTGCTGGCC        60

Ramirez-Miranda, Mol Vis 2006; 12:318-323 <http://www.molvis.org/molvis/v12/a34/>
©2006 Molecular Vision <http://www.molvis.org/molvis/>
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