Table 1 of Piri, Mol Vis 2006; 12:1660-1673.


Table 1. Oligonucleotides used in semiquantitative and real-time RT-PCR analyses of differentially expressed genes

AW529036, BM389543, BF281839, AI112106, BQ200097, BF284887, BG665267, AI171466, BQ192099, BQ781402, BF562863, AW522386, and BF404316-uncharacterized genes or ESTs; U78517-cAMP regulated guanine nucleotide exchange factor II (GEF); NM_017134-arginase 1 (Arg1); NM_053346-neuritin (Nrn); NM_053955-crystallin mu (Crym); NM_017009-glial fibrillary acidic protein (Gfap); NM_031144-β-actin (Actb).

Target gene         Direction        Sequence (5'-3')
-----------------   ---------   ---------------------------
   Target gene      Direction        Sequence (5'-3')
-----------------   ---------   ---------------------------
AW529036            Forward     TGGTGCACTCTGAGGCTGAA
                    Reverse     CCAGTTTCAAGATGTTGTTACCA
BM389543            Forward     TCTCCTTCTCCAGGCCGACA
                    Reverse     TAAACCAACACCCGACACAA
BF281839            Forward     TGCCAACCGATGTCGCATAAC
                    Reverse     TGCAGATTGAGTGATGTGTGT
AI112106            Forward     GCATGAAGACACAAATCTGGC
                    Reverse     GGCTTCCACACAGAATTATCAG
BQ200097            Forward     CCAGGTGTCAATTGTAGCAAG
                    Reverse     AGCCAGCACTTAACAGACGAT
BF284887            Forward     ACCTGAGGCCTAGATACTAGC
                    Reverse     AAGCTTCAATCACACAATTCAGT
BG665267            Forward     GAGTCAGAACCTTGTATCTTATG
                    Reverse     GACATATGGCACTGTAAGGACA
AI171466            Forward     CGGACACCAGTAAGTACACA
                    Reverse     GCTGGGGTGCTGAGGATATA
BQ192099            Forward     ACAAGACGATCCATGCGGAG
                    Reverse     TCCTGGCAGCAATGACCACA
BQ781402            Forward     AGGGCTTAGTGGCAAATGCTA
                    Reverse     GGCCTGATCTTCATCTTAGGC
BF562863            Forward     CCAAGTGTGTATCCCCAACC
                    Reverse     CCCACAAAGAAGCTAAAGGC
AW522386            Forward     CTCCCCAGATGTTTTTGAGG
                    Reverse     CTCCCATGACGTCAGTGGAA
BF404316            Forward     GCTAATCACACTGCATCTGAC
                    Reverse     GTCTACAGGACATGTGCTTAC
U78517 (GEF)        Forward     GGAACCTCATCACAACACTATG
                    Reverse     TCTATACCATTGACTGCATAACC
NM_017134 (Arg1)    Forward     CCTATCTTACAGAGAAGGTCTC
                    Reverse     TGGCCTGGTTCTGTTCGGTT
NM_053346 (Nrn)     Forward     AATGAGCTCAAGAGTGATGCC
                    Reverse     AACTGAAGGAGGCGACGACAA
NM_017009 (GFAP)    Forward     AACAGGATACCACCCCAAAGGCAATCA
                    Reverse     AGATGCCTAGGCCTCTGGCTAGAGATT
NM_053955 (Crym)    Forward     ACTGGATGACGAGCTCATGAA
                    Reverse     ACAGCTCCTTCTGCTCACTTG
NM_019238 (Fdft1)   Forward     GCAGCTCATCTCCAACATCA
                    Reverse     ACCCACTTCACGTGGACTTC
NM_031144 (Actb)    Forward     CTAGACTTCGAGCAAGAGATGGCCACT
                    Reverse     TAGGAGCCAGGGCAGTAATCTCCTTCT
NM_012673 (Thy-1)   Forward     AGCCTGACCCGAGAGAAGA
                    Reverse     AAGTCCGTGGCTTGGAGGAA
XM_344756 (Brn3b)   Forward     GGATGTCTTAATCGTGTAGATCTG
                    Reverse     GTAAGCACCAAGTGGAGAACG

Piri, Mol Vis 2006; 12:1660-1673 <http://www.molvis.org/molvis/v12/a190/>
©2006 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535