Table 3 of
Horie, Mol Vis 2006;
12:1601-1605.Table 3 of
Horie, Mol Vis 2006;
12:1601-1605.
Table 3. Estimated haplotype frequencies for TYR loci
Association analysis of haplotype in each candidate loci. All haplotypes with a frequency >1% are displayed. Numbers in the heading are as follows: 1 represents D9S0128i, 2 represents D9S0926i, 3 represents D9S267. p-value based on chi-square distribution. Permutation p-values based on 10,000 permutations.
VKH Healthy
patients controls
All --------- ---------- permutation
1 - 2 - 3 cases (%) (n=87; %) (n=122; %) Chi-square p-value p-value
----------- --------- --------- ---------- ---------- ------- -----------
259-313-162 32.25 27.43 37.12 4.30 0.038 0.058
259-311-162 7.43 8.25 6.62 0.40 0.528 0.643
259-313-170 7.18 7.02 7.21 0.01 0.941 0.958
267-311-162 4.20 2.18 6.25 3.87 0.049 0.174
259-313-160 3.25 4.97 1.25 5.17 0.023 0.085
267-311-170 3.20 5.52 1.31 6.06 0.014 0.094
269-301-162 2.54 3.19 2.08 0.51 0.477 0.535
259-311-170 2.37 3.02 2.25 0.24 0.624 0.777
265-311-162 2.04 3.30 0.40 5.39 0.020 0.118
267-313-162 2.02 1.92 1.86 0.00 0.964 0.985
259-311-160 1.76 1.65 2.12 0.12 0.730 0.786
259-313-164 1.67 0.34 2.69 4.76 0.029 0.159
267-309-162 1.60 2.08 0.93 0.98 0.323 0.438
259-315-170 1.53 1.51 1.56 0.00 0.967 0.973
259-309-170 1.35 2.52 0.44 3.41 0.065 0.144
259-313-172 1.15 1.95 0.45 2.15 0.143 0.273
259-313-168 1.14 1.28 1.02 0.06 0.804 0.928
267-301-170 1.13 1.66 0.33 2.04 0.153 0.274
259-307-162 1.12 0.57 1.54 0.84 0.359 0.509
259-317-162 1.10 1.15 0.90 0.06 0.800 0.778
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