Table 3 of Stambolian, Mol Vis 2006; 12:1499-1505.


Table 3. Combined heterogeneity LOD scores using multipoint family LOD scores from both genome screens

Combined HLOD data (44 families from previous genome scan and 19 families from current scan) support location of a locus for common myopia to 22q11.2. HLOD scores were calculated assuming that penetrance of the dominant risk allele is 0.9 and the phenocopy rate is 0.10. Megabase locations from the UCSC Genome Browser (March, 2006 assembly) and the Marshfield Genetic map are provided for reference.

                                               Results at loci    Results at loci
                                                with combined      from previous
                                                   analysis        genome screen
                                    Genetic     (63 families)      (44 families)
                                      map      ----------------   ---------------
             Nearest    Megabase    (Kosambi   Combined
Chromosome    marker    location      cM)        HLOD     Alpha   HLOD      Alpha
----------   --------   ---------   --------   --------   -----   ----      -----
8p22         GAAT1A4    99258915    110.2      0.31       0.11    1.17      0.19
11q23        D11S912    128129303   131.26     0.73       0.16    1.24      0.19
13q22        D13S317    81620034    63.9       1.38       0.22    1.43      0.26
14q32        D14S1426   99689318    125.88     1.53       0.31    1.29      0.34
15q26        D15S642    100152295   122.14     1.65       0.4     0         0
22q11.2      D22S685    100152295   32.39      4.73       0.38    3.54      0.4

Stambolian, Mol Vis 2006; 12:1499-1505 <http://www.molvis.org/molvis/v12/a171/>
©2006 Molecular Vision <http://www.molvis.org/molvis/>
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