Table 1 of
Hanna, Mol Vis 2006;
12:961-976.
Table 1. Primer sets against human sequences used in fresh-tissue PCR
"Accession number" represents GenBank accession number for the corresponding human gene. "Location" represents position of initial nucleotide for forward and reverse primer pairs. "Human sequence" represents sequence for design of forward and reverse primers. "Size" represents number of base pairs in expected PCR product.
Accession Size Gene number Location Human sequence (5'-3') (bp) -------- --------- -------- --------------------------- ---- GluR1 NM_000827 1870 F: AGACAACCAGTGACCAGTCCAATG 502 2371 R: GAATCCAAGTTACCTCCCACCTTC GluR2 NM_000826 1812 F: TTTTTGCCTACATTGGGGTCAG 503 2314 R: TTTGGACTTCCGCACTCTAGCCAC GluR3 NM_000828 1967 F: TTGGAGTCAGCGTAGTTCTTTTCC 501 2467 R: TTCCCTTGGACTTTCGCACTCG GluR4 NM_000829 1723 F: ACAGAAGAGCCAGAGGACGGAAAG 500 2222 R: TCACATGGCTTTCGCTGCTC GluR5 NM_000830 1776 F: CCACCATTCTGGAAGAACCCTATG 495 2270 R: TGTTTTCCACCACGTCTGAGTCAG GluR6 NM_021956 2260 F: CAGATTGGCGGCCTTATAGACTC 456 2715 R: TTCTTTACCTGGCAACCTTCTGTC GluR7 NM_000831 2282 F: AGATTGGGGGACTCATTGACTC 479 2760 R: TAAGGATGTGCTGCAGGCCATG KA1 NM_014619 2041 F: AATTCCCGCTACCAGACCTACC 484 2524 R: AGACGGACACCTCAGTTGCTTC KA2 NM_002088 1287 F: GTGGTCACAACCATCCTGGAGAAC 485 1771 R: AGGCATGGGTGTGGGTTATAC mGluR1 NM_000838 1824 F: AGGGCCAGATTAAGGTTATACGG 493 2316 R: CAGATCTTCTTCTTGCTGCCAGC mGluR2 NM_000839 1845 F: CTCTGCTACTGCATGACCTTCATC 489 2333 R: CAGGAATGCCAGCCAGATGATG mGluR3 NM_000840 1703 F: GTCACTGGGCAGAAACCTTATCG 513 2215 R: AGATAGCGAAGGAACTCCCCAG mGluR4 NM_000841 1983 F: GTGGTGATCACCTTTGTGCGCTAC 486 2468 R: TGTGACCATGAGCAGCATACTG mGluR5 NM_000842 3738 F: CCCCGTGTTCACACACACACAATG 520 4457 R: GCCTCCGTAAATACTGGACCCAAG mGluR6 NM_000843 2675 F: CGGCATGCTCTACGTACCCAAAAC 485 3159 R: AATCTCCCGCAAACCAGGCAAAGC mGluR7 NM_000844 2281 F: CACTTTCATCCGCTACAATGACAC 483 2763 R: CCGAGTCTTGATGGCATACACAG mGluR8 NM_000845 1450 F: GGAGATGCTCCTGGACGTTATG 486 1935 R: TAGGAGCACGTAACTAAGTTCGCG EAAT1 (GLAST) NM_004172 819 F: TAAACAATGTGTCTGAGGCCATGG 207 1025 R: CTACCAGTCTCATGATGGCTTCG EAAT2 (GLT-1) NM_004171 1256 F: TTCATTGCTTTTGGCATCGC 191 1446 R: TGCCTAGCAACCACTTCTAAGTCC EAAT3 (EAAC-1) NM_004170 808 F: ATTCAGATGGCATAAACGTCCTGG 188 995 R: CCGAGCAATCAGGAACAAAATACC EAAT4 NM_005071 706 F: GAACCAGCTTCCTGGAAAATGTC 202 907 R: TTGAGGCTGTCGAAGAAGTCCCTG EAAT5 NM_006671 877 F: TCAGCTTCTGCCAGTGCCTCAATG 208 1084 R: TAGAGCAGGGGCAGGATAAAGAGC |