Table 12 of
Cameron, Mol Vis 2005;
11:775-791.Table 12 of
Cameron, Mol Vis 2005;
11:775-791.
Table 12. Retina-specific transcripts relative to brain
The fifty most tissue-specific transcripts of zebrafish retina, ranked in descending order, compared to zebrafish brain. The listed gene product is derived from either (a) that reported directly in the GenBank record for the particular accession number or (b) inferred by a combination of Blastn and/or Blastp searches of the nucleotide and/or protein sequences for the accession number.
GenBank log2 accession signal number Gene product ratio --------- ----------------------------------------------------- ------ BG308636 guanine nucleotide-binding protein G(I)/G(S)/G(O) γ-8 -10.5 subunit BI670924 retinal cone rhodopsin-sensitive cGMP PDE γ-subunit -10.3 NM_131039 es1 -10.0 AY044457 guanylate cyclase-activating protein 3 (GCAP-3) -8.9 BG305719 EST -8.6 BM101572 oxysterol binding protein-like -8.4 NM_131871 guanylyl cyclase-activating protein 2 (gcap2) -8.3 BI671344 EST -8.1 BI879857 rod transducin alpha subunit -8.1 BI670985 EST -8.1 BI879707 arrestin 3 -8.0 NM_131253 green-sensitive opsin 1 (grops1) -8.0 BI671149 EST -7.9 BI671354 EST -7.8 BI880056 phosducin 1 -7.8 BG305602 recoverin -7.8 NM_131869 cone transducin α subunit (gnat2) -7.8 NM_152940 cone-rod homeobox (crx) -7.7 BI879650 GTP-binding regulatory protein β-3 chain -7.7 BG306392 phosphodiesterase 6C, cGMP-specific, cone, α prime -7.7 BI880387 EST -7.7 BG305942 EST -7.6 BM860491 rhodopsin -7.6 BI879950 ultraviolet-sensitive opsin -7.6 BI671344 EST -7.5 BC049482 peripherin (retinal degeneration slow; rds) -7.3 BG306043 phosphate carrier precursor isoform 1a -7.3 BI671090 annexin 11b -7.3 BQ450488 guanylyl cyclase 3 -7.2 BG306391 ADP-ribosylation factor-like 3 -7.2 BG308580 EST -7.2 BI671261 phosducin 1 -7.2 AW826665 EST -7.2 BI879633 3,5-cyclic-GMP phosphodiesterase alpha chain -7.2 AL911078 fatty acid-binding protein -7.1 AA566540 clusterin-like 1 (retinal) -7.1 AW826568 cone transducin alpha subunit -7.1 BI878361 EST -7.0 BI879067 EST -7.0 BI879890 EST -7.0 BG306463 cGMP-gated cation channel alpha 1 -7.0 BI670894 guanylate kinase 1 -7.0 BI879519 cone transducin gamma subunit -7.0 BI879476 EST -7.0 BG305579 ADP-ribosylation factor-like 3, like 1 -7.0 BG305696 rhodopsin -7.0 BI671385 EST -6.9 NM_131175 red-sensitive opsin (rdops) -6.9 BG308558 EST -6.8 NM_131870 guanylyl cyclase-activating protein 1 (gcap1) -6.7 |