Table 1 of Hawse, Mol Vis 2005; 11:274-283.


Table 1. Primers used for RT-PCR

The table lists the sequences, GenBank accession numbers, annealing temperatures, product lengths, and abbreviations for all gene specific primers used in this study.

                                                            Annealing    Product
                                                           temperature   length    Accession
     Gene (Abbreviation)        Primer sequence (5'-3')       (°C)        (bp)      number
-----------------------------   ------------------------   -----------   -------   ---------
Aquaporin 1 (AQP1)              AGCCTCTTATGGGGGTGTTTCTAT       56          417     NM_000385
                                ATTCCAAGGTCAGGCAGTAAGTCC       56          417     NM_000385

Chloride channel (CLCA2)        AGCCTGGGCACTGGACTTACA          56          388     NM_006536
                                GGGGTGCTTATGCTGGGAGAG          56          388     NM_006536

EST                             GTGAAGGCATCCCTGGTAGA           60          321     BF513244
                                TGGCTGAGCTGGTCCTTAAT           60          321     BF513244
                                AAGCCACATATGCCTCCAAG           60          336     AI189753
                                CATGAAAACTGTGGCAAACG           60          336     AI189753

Gap junction protein alpha 1    AGGCGGGAAGCACCATCTCTA          56          372     NM_000165
  (GJA1)                        CCACCCATCTACCCCCATACACC        56          372     NM_000165

Glutathione synthetase (GSS)    ATTTGACCAGCGTGCCATAGAGA        56          372     NM_000178
                                AGTGAGTAGAGGCCAGCAAAGGTG       56          372     NM_000178

Hypothetical protein            CGTAGCCTCATTCCCAGGTA           60          375     AL136727
                                TGTTTGCTCCTGAGGCTTTT           60          375     AL136727
                                GGCCGTATCAAGGAGATTCA           60          349     NM_018104
                                CCCTTTGACGTAGGAAACCA           60          349     NM_018104
                                TTGATGTCAACATGGGCTGT           60          372     NM_017803
                                TGGCTTGTCGAAAGTCCTCT           60          372     NM_017803

Insulin-like growth factor      TCTGCTCACCCAGAGACCTT           60          368     AW007532
  binding protein 5 (IGFBP5)    GAAGGGGCATGATCAGAAAA           60          368     AW007532

Laminin receptor 1 (LR1)        CGCTCCAGTCTTCAGTAGGG           60          383     AW304232
                                CTACCCTACCATTGCGCTGT           60          383     AW304232

Lens epithelial protein         TCCTCCTCTGCTGCTGGTGTATCA       61          426     NM_018655
  (LENEP)                       GGTTTCTTAGGGGGCAGTCCATTC       61          426     NM_018655

Metallothionein Ig (MTIg)       GCCTCTTCCCTTCTCGCTTG           56          217     NM_005950
                                GACATCAGGCGCAGCAGCTG           56          217     NM_005950

Metallothionein Ih (MTIh)       GAACTCCAGTCTCACCTCGG           56          213     NM_005951
                                GACATCAGGCACAGCAGCTG           56          213     NM_005951

Nuclear receptor coactivator    TCAATGCAGGTGAACAAAGTG          60          342     AI040324
  2 (NRC2)                      TTCCTACATAGCTGTCCGATG          60          342     AI040324

PAX 6 (PAX6)                    CAGGGCAATCGGTGGTAGTAAA         56          520     NM_000280
                                TTCTCGGGCAAACACATCTGGA         56          520     NM_000280

Peroxiredoxin 6 (PRDX6)         TCCAACCATCCCTGAAGAAGAA         56          386     NM_004905
                                AGCCCTGCAGAGATCCAACAAG         56          386     NM_004905

Protocadherin gamma             TTGGTTTGGATCTCGGTAGC           60          368     NM_002588
  subfamily c (PCDHGC3)         TCGGCTCAGCTCATAGGTTT           60          368     NM_002588

Tissue inhibitor of             GGGCTGTGCAACTTCGTGGAGA         61          333     NM_000362
  metalloproteinase 3 (TIMP3)   CAGCGGGAAGGGAGGGAAGTGA         61          333     NM_000362

Transcription elongation        GCGGTTGAAGTGTAGGGAGA           60          340     X57198
  factor A (TFIIS)              AGTCTTGGCCATCTGATGCT           60          340     X57198

Unknown protein                 GGTGACTTCACACGCCATAA           60          302     BC001224
                                TCGAGTTGTCCACAGTCAGC           60          302     BC001224

Hawse, Mol Vis 2005; 11:274-283 <http://www.molvis.org/molvis/v11/a32/>
©2005 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535