Table 9 of Vihtelic, Mol Vis 2005; 11:1083-1100.


Table 9. Abundant posterior segment (minus retina) transcripts

Genes identified in the cDNA library made from posterior segment tissues lacking retinas are ranked according to transcript abundance. GenBank accession numbers, UniGene clusters and chromosome assignments for some of the genes are shown. The numbers of sequenced clones in each gene cluster (n) are also listed.

Rank                  Gene name                     GenBank      UniGene   Chromosome    n
----   ----------------------------------------   ------------   -------   ----------   ---
 1     ba1 globin                                 NM_131020      25155          3       118
 2     hemoglobin α adult 1                       U50381         1411           3        47
 3     probable ortholog of U6 snRNA-associated   BC044441       8153           1        36
       LSm3
 4     elongation factor 1 α                      L23807         261           19        31
 5     rhodopsin                                  AF109368       354            8        25
 6     glyceraldehyde-3-phosphate dehydrogenase   BC083506       30628                   25
 7     β actin 2                                  NM_181601      1109          20        25
 8     ribosomal protein P0                       AF134852       11308          7        22
 9     ribosomal protein L3                       AY561514       30264          3        21
10     ribosomal protein SA                       NM_201052      1065                    20
11     solute carrier family 25 α, member 5       AF506216       20008         14        19
12     ribosomal protein S2                       NM_213279      1126                    18
13     purine 5'-nucleotidase                     NM_001004549   3959                    16
14     β thymosin                                                                        15
15     zinc finger transcription regulator        CR847822       490                     14
16     β actin 1                                  AF057040       25213          1        13
17     type II cytokeratin                        AF197909       1434          23        13
18     unidentified transcript                                                           13
19     SR/ER calcium ATPase 1                     AB178533       29167          3        12
20     regulation of G protein signaling 5        NM_199962      13030                   12
21     myelin basic protein                       AY860977       7462          19        12
22     creatine kinase, M chain                   NM_213121      24950         15        12
23     β 2 microglobulin                          L05384         184            4        12
24     rod cGMP-specific PDE γ                    NM_200785      26340                   11
25     heat shock protein 8                       AY422994       24802         10        11
26     creatine kinase, muscle                    AY036972       18267          5        11
27     ribosomal protein L7a                      NM_200047      28241                   11
28     G protein, β polypeptide 2-like            AY423038       1368          14        10
29     myosin, heavy polypeptide 2                AY333450       4812                    10
30     α actin 1                                  AY222742       29739         13        10
31     invariant chain-like protein 1             AF114830       7740          14        10
32     telethonin sarcomeric protein              BC075941       31388                   10
33     nuclease sensitive element binding         AF093129       1161           8         9
       protein1
34     ferritin, heavy polypeptide 1              AF295373       6496           7         9
35     ribosomal protein L11                      NM_001002139   1353                     9
36     zinc finger protein (D93)                  AB055669       25291                    9
37     fructose-bisphosphate aldolase a           AY394966       19225          3         9
38     desmoyokin                                                973           14         9
39     keratin 8                                  NM_200080      1282          23         8
40     type I cytokeratin                         NM_001003445   12425                    8

Vihtelic, Mol Vis 2005; 11:1083-1100 <http://www.molvis.org/molvis/v11/a127/>
©2005 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535