Table 7 of Vihtelic, Mol Vis 2005; 11:1083-1100.


Table 7. Anterior segment (minus lens) abundant transcripts

The most abundant transcripts from anterior segment tissues not including lenses are listed in the table. GenBank accession numbers, UniGene cluster identifications, and chromosome assignments are shown. The genes are ranked by transcript abundance with the numbers of sequenced clones in each gene cluster (n).

Rank                   Gene name                     GenBank      UniGene   Chromosome   n
----   -----------------------------------------   ------------   -------   ----------   --
  1    gelsolin                                    AF175294       10639                  67
  2    type II cytokeratin                         AF197909       1434          23       66
  3    type I cytokeratin                          NM_001003445   12425                  48
  4    elongation factor 1 α                       AY422992       261           19       39
  5    probable ortholog of U6 snRNA-associated    BC044441       8153           1       31
       LSm3
  6    prostaglandin D synthase-like               AB071601       1192          24       28
  7    rhodopsin                                   AB087811       354            8       22
  8    apoliprotein Eb                             NM_131098      1246          19       22
  9    zinc finger protein (D93)                   AB055669       25291                  21
 10    dentin sialophosphoprotein (DSPP)                          6411                   18
       similarity
 11    β actin 2                                   NM_181601      1109          20       16
 12    zinc finger transcription regulator         CR847822       490                    16
 13    peptidase motif-encoding locus              BC097230       5167                   15
 14    type I cytokeratin                          NM_001002383   29413                  14
 15    ribosomal protein L3                        AY561514       30264          3       14
 16    β thymosin                                                                        13
 17    unidentified transcript                                                           12
 18    polyadenylate-binding protein 1             BC062832       12233                  11
 19    β actin 1                                   AF057040       25213          1       11
 20    ribosomal protein S2                        NM_213279      1126                   11
 21    ba1 globin                                  NM_131020      25155          3       11
 22    β galactosidase                             BC097004       33518         12       10
 23    invariant chain-like protein 1              AF114830       7740          14       10
 24    solute carrier family 25 α, member 5        AF506216       20008         14       10
 25    transcribed locus                           BX248521       45971         23       10
 26    heat shock protein 90 β                     AF068772       31066         20        9
 27    v-fos osteosarcoma viral oncogene homolog   NM_205569      12986                   9
 28    MHC class 1 UEA                             NM_131705      21017         19        8
 29    selenoprotein P, 1a                         AF322071       1330          17        8
 30    creatine kinase, brain                      AY055849       296           20        8
 31    aquaporin 3                                 NM_213468      922            5        8
 32    hypothetical protein LOC558130 similarity   XM_699646      839           18        8
 33    β 2 microglobulin (b2m)                     L05383         184            4        7
 34    annexin A1a                                 AY178793       59             5        7
 35    β 2 microglobulin (zgc:64161)               NM_213126      4269           5        7
 36    type I collagen, α 1                        AY380817       20097          3        7
 37    CCAAT/enhancer binding protein, δ           AF306855       1280          24        7
 38    ribosomal protein L4                        NM_213107      1347          25        7
 39    ribosomal protein P0                        AF134852       11308          7        7
 40    ribosomal protein SA                        NM_201052      1065                    7

Vihtelic, Mol Vis 2005; 11:1083-1100 <http://www.molvis.org/molvis/v11/a127/>
©2005 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535