Table 6 of
Vihtelic, Mol Vis 2005;
11:1083-1100.Table 6 of
Vihtelic, Mol Vis 2005;
11:1083-1100.
Table 6. Abundant lens transcripts, not including crystallins
The genes corresponding to the most abundant transcripts in the adult lens that are not crystallins are listed in the table. GenBank accession numbers and UniGene cluster identifications are shown. Some of the genes identified by Unigene matches were not identified by GenBank entries. Chromosome assignments for some of the identified genes and the numbers of sequenced clones in each gene cluster (n) are also listed in the table.
Rank Gene name GenBank UniGene Chromosome n ---- ----------------------------------------- ------------ ------- ---------- -- 1 cystatin B 1077 21 52 2 hypothetical protein LOC564660 similarity XM_687989 45961 25 3 prostaglandin D synthase-like 43587 24 4 major intrinsic protein 1 NM_001003534 33905 22 5 golgi complex-associated protein 30892 22 6 lens epithelial protein (LEP503) AL909569 43618 20 similarity 7 beaded filament protein CP49 NM_001008633 19486 19 8 lengsin 45964 19 9 transcribed locus 45963 18 10 CR704484 similarity (T. nigroviridis AL954310 19653 15 cDNA) 11 lactase-phlorizin hydrolase NM_001002735 12736 14 12 galectin-related inter-fiber protein NM_001003430 29431 14 13 β actin 1 AF057040 25213 1 13 14 major intrinsic protein 2 DQ003080 42066 12 15 elongation factor 1 α L233807 261 19 12 16 serine proteinase inhibitor (serpin) NM_001002653 32110 11 17 vimentin NM_131872 31832 10 18 β actin 2 NM_181601 1109 20 10 19 hypothetical protein LOC564481 similarity XM_687815 45966 10 20 elastase 2A similarity BC096881 41067 9 21 AHNAK nucleoprotein 1 similarity CR933839 38711 9 22 ribosomal protein P0 AF134852 11308 7 8 23 probable ortholog of U6 snRNA-associated BC044441 8153 1 7 LSm3 24 ribosomal protein L4 NM_213107 1347 25 7 25 β 1 integrin binding protein 2 NM_198877 781 6 26 ribosomal protein L7a NM_200047 28241 5 27 nucleosome assembly protein 1-like 1 NM_201318 11316 9 5 28 unidentified transcript 5 29 hypothetical protein CAI11620 similarity BX649648 20055 4 5 30 lens intrinsic membrane protein 45965 5 (LIM2/Mp19) 31 BTB/POZ domain-containing protein XP_683330 9981 8 5 similarity 32 midkine-related growth factor a NM_131070 20373 7 4 33 cysteine dioxygenase type 1 NM_200741 8833 4 34 SPARCL1 AY575074 31009 4 35 ribosomal protein L6 AY648833 28231 8 4 36 eukaryotic translation initiation AY577010 5435 20 4 factor 5 37 ribosomal protein S3A NM_200059 907 1 4 38 ribosomal protein S2 NM_213279 1126 4 39 transcribed locus 44991 4 40 transcribed locus 45414 4 |