Table 4 of
Vihtelic, Mol Vis 2005;
11:1083-1100.Table 4 of
Vihtelic, Mol Vis 2005;
11:1083-1100.
Table 4. Abundant transcripts from the whole eye library
Genes corresponding to the most abundant transcripts in the whole eye library are listed and ranked by abundance. GenBank accession numbers and UniGene cluster identifications are shown. Chromosome assignments for some of the identified genes and the total numbers of sequenced clones in each gene cluster (n) are also listed.
Rank Gene name GenBank UniGene Chromosome n ---- ----------------------------------------- ------------ ------- ---------- -- 1 rhodopsin AF109368 354 8 97 2 rod cGMP-specific PDE γ NM_200785 26340 42 3 retinol binding protein 4-like NM_199965 10292 21 24 4 γS1-crystallin AY738745 15246 20 5 G protein, α polypeptide 1 NM_131868 9899 6 18 6 type II cytokeratin AF197909 1434 23 16 7 creatine kinase, brain AY055849 296 20 16 8 cone cGMP-specific PDE γ NM_200837 9925 15 9 G protein, β polypeptide 3 NM_213202 9922 19 12 10 ultraviolet-sensitive opsin (SWS-1) AF109373 8194 4 11 11 βB2-crystallin DQ000467 44992 11 12 elongation factor 1-α NM_131263 261 19 11 13 βB3-crystallin DQ000468 41866 11 14 cone cGMP-specific PDE α prime NM_200871 9841 12 10 15 retinal degeneration slow (RDS; NM_201014 9906 10 peripherin) 16 unidentified transcript 10 17 β actin 2 NM_181601 1109 20 9 18 type I cytokeratin NM_001003445 12425 9 19 calcium binding protein 5 NM_200698 27146 9 20 G protein, α polypeptide 2 NM_131869 9881 8 9 21 phosducin 1 BC060908 26950 8 22 G protein, γ polypeptide 1 NM_199967 9835 19 8 23 chromosome 20 ORF 149 homolog NM_200079 24898 20 8 24 β actin 1 AF057040 25213 1 8 25 apolipoprotein Eb NM_131098 1246 19 8 26 γM6-crystallin AY738751 15363 7 27 prothymosin α BC059613 45285 7 28 ba1 globin NM_131020 25155 3 7 29 green-sensitive opsin (MWS-2) NM_182891 9850 6 6 30 translationally controlled tumor protein NM_198140 17536 1 6 31 arrestin 3, retinal (X-arrestin) NM_200792 9825 6 32 arrestin β 1 BC080258 29906 6 33 red-sensitive cone opsin (LWS-2) NM_001002443 26759 6 34 ribosomal protein P0 AF134852 11308 7 6 35 es1 protein NM_131039 1461 8 6 36 guanylate cyclase activator 1C AY044457 14300 6 37 proline-rich nuclear receptor coactivator 33624 16 6 38 neurocalcin (visinin-like) NM_001003776 33992 5 39 ribosomal protein L12 AY648813 24686 5 5 40 interphotoreceptor retinoid-binding X85957 5738 12 5 protein |