Table 1 of Gomez-Cabrero, Mol Vis 2005; 11:1071-1082.


Table 1. Oligonucleotides used to modify the pRSETA vector

The nucleotides marked in red indicate the NheI sites. The nucleotides marked in blue indicate the XhoI sites. The nucleotides marked in brown indicate the EcoRI site. The nucleotides marked in orange indicate the HindIII site. The nucleotides marked in green indicate the transduction sequence PTD4. In oligonucleotide bGalXC-F and XhoI-Profilin, the nucleotides marked in purple indicate the first codon. In oligonucleotide bGalSE-R and Profilin-HindIII, the nucleotides marked in turquoise indicate the last codon.The asterisk indicates a compatible end.

 Oligonucleotide                  Sequence (5'-3')
-----------------   --------------------------------------------
pre-PTD4-MCS-F      CTAGCATGACTGGTGGACAGCAAATGTGTACAGGTGGTTACGCT
                    NheI*                           GlyGly

                    CGGGCTGCTGCTCGGCAGGCTCGGGCTGGTGGTGGTGGTC
                              PTD4             GlyGlyGlyGly XhoI*

pre-PTD4-MCS-R      TCGAGACCACCACCACCAGCCCGAGCCTGCCGAGCAGCAGCCCG
                    XhoI*GlyGlyGlyGly            PTD4

                    AGCGTAACCACCTGTACACATTTGCTGTCCACCAGTCATG
                          GlyGly                          NheI*

pre-MCSnoPTD4-F     CTAGCATGACTGGTGGACAGCAAATGACGCGTC
                    NheI*                          XhoI*

pre-MCSnoPTD4-R     TCGAGACGCGTCATTTGCTGTCCACCAGTCATG
                    XhoI*                          NheI*

bGalXC-F            ATCTATCTCGAGCCCGTCGTTTTACAAC
                          XhoI   beta-Gal first codon

bGalSE-R            TAAATGAATTCCTTTTTGACACCAGACCAAC
                         EcoRI   beta-Gal last codon

XhoI-Profilin       TAATAACCGCTCGAGATGGCCGGG
                             XhoI   Profilin first codon

Profilin-HindIII    CCCCCAAGCTTGGGGTACTGGGAAC
                         HindIII   Profilin last codon
                                   (nt 556-554 in NM_005022)

Gomez-Cabrero, Mol Vis 2005; 11:1071-1082 <http://www.molvis.org/molvis/v11/a126/>
©2005 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535