Table 1 of Zhang, Mol Vis 2005; 11:977-985.


Table 1. Primers for sequencing and deletion detection

Primers for sequencing and deletion detection. Primers were selected using the PrimerSelect program of the Lasergene package (DNASTAR, Madison, WI). The number following the "E" in the primer name indicates the exon region of the GRK1 (RHOK) gene; the forward (F) and reverse (R) primers are indicated in the last character of the name. Length of the PCR products for exon RHOK-E4 is approximate as the whole genomic sequence around exon 4 is incomplete in the human genome database.

                                                   PCR
                                            Tm    length
  Name            Sequence (5'-3')         (°C)    (bp)
---------   ----------------------------   ----   ------
RHOK-E1AF   CAGGCCAAGGGCAGCAGTCAGG         61.8    497
RHOK-E1AR   TTCGCCACTATCCCCTCATCCA

RHOK-E1BF   CGGCCCTGGAGCTCTGGAAAGA         63.5    551
RHOK-E1BR   TAAGGGCCCCGGAGCCGACAGT

RHOK-E2F    TGCGACTGCTCCGTGGCTGTG          60.6    394
RHOK-E2R    AGCGAGAAGGGGATTGTGATGG

RHOK-E3F    TGGCCTTCGGGTGTCCTCTGC          62      436
RHOK-E3R    ATGAACCCCCACCGTCCACAC

RHOK-E4F    CGCCTGTCCTGTGCAGCCAG           63      150
RHOK-E4R    GTAACCCATGCACGGAGCCT

RHOK-E5F    GCATCCCCAGAGCATCAGTCC          61      339
RHOK-E5R    CCACCCCAGGGCCCACAGAACAA

RHOK-E6AF   GAGGCGGGTCTGGCAGGGCTAAG        63.6    387
RHOK-E6AR   GGGCCTTGCTGGGGGCAGAG

RHOK-E6BF   TTCTGCGAGGCGCTGCTGGAGA         62.7    524
RHOK-E6BR   GCGCACATAGTATCTTCCGCATCC

RHOK-E7F    CCATGGGGGAGGGGGCTTTTTG         62.8    519
RHOK-E7R    GGAGATGGCGTGATGGGGACCTG

RHOK-D1     GTGGTGCTGTGGGGGACGTGTGATGC
RHOK-D2     AGGCGGAGGGGAGGGGACATTGGGAAGT
RHOK-D5     TGACGGTGGAGGGCGCAGGGTGTAG

Zhang, Mol Vis 2005; 11:977-985 <http://www.molvis.org/molvis/v11/a117/>
©2005 Molecular Vision <http://www.molvis.org/molvis/>
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