Figure 1 of Cassar, Mol Vis 2004; 10:808-813.


Figure 1. Partial protein sequence from three human forms of CNGA3

Variant 1 depicts sequence reported from human cone tissue. The DNA sequence of the novel exon unique to Variant 3 is in blue. DNA sequence of Exon 5, unique to Variant 1, is in orange. DNA sequences of exons 3, 4, and 7 are in red, brown, and purple, respectively.

Variant 1   L   S   R   A   H   S   S   S   E   E   T   S   S   V   L   Q   P   G   I   A   M   E   T   R   G
Variant 2   L   S   R   A   H   S   S   S   E   E   T   S   S   V   L   Q   P   G   I   A   M   E   T   R   G
Variant 3   L   S   R   A   H   S   S   S   E   E   T   S   S   V   L   Q   P   G   I   A   M   E   T   R   G
           CTC AGC AGA GCC CAC TCG TCA AGT GAG GAG ACA TCG TCA GTG CTG CAG CCG GGG ATC GCC ATG GAG ACC AGA GGA
                                                            Exon 3

Variant 1   L   A   D   S   G   Q   G   S   F   T   G   Q   G   I   A   R
Variant 2   L   A   D   S   G   Q   G   S   F   T   G   Q   G   I   A   R
Variant 3   L   A   D   S   G   Q   G   S   F   T   G   Q   G   I   A   R   F   G   R   I   Q   K   K   S   Q
           CTG GCT GAC TCC GGG CAG GGC TCC TTC ACC GGC CAG GGG ATC GCC AGG TTT GGA AGA ATT CAG AAA AAA AGC CAA

Variant 1
Variant 2
Variant 3   P   E   K   V   V   R   A   A   S   R   G   R   P   L   I   G   W   T   Q   W   C   A   E   D   G
           CCG GAG AAG GTG GTA AGA GCA GCC AGC CGT GGG AGA CCT TTG ATT GGG TGG ACA CAG TGG TGT GCT GAG GAT GGT
                                                            Variant 3 novel exon

Variant 1                                                                                       L   S   R   L
Variant 2                                                                                       L   S   R   L
Variant 3   G   D   E   S   E   M   A   L   A   G   S   P   G   C   S   S   G   P   Q   G   R   L   S   R   L
           GGT GAT GAG TCT GAA ATG GCT CTG GCA GGG TCT CCC GGG TGC TCG TCT GGA CCC CAG GGC AGG CTG TCG CGC CTC

Variant 1   I   F   L   L   R   R   W   A   A   R   H   V   H   H   Q   D   Q   G   P   D   S   F   P   D   R
Variant 2   I   F   L   L   R   R   W   A   A   R   H   V   H   H   Q   D   Q   G   P   D   S   F   P   D   R
Variant 3   I   F   L   L   R   R   W   A   A   R   H   V   H   H   Q   D   Q   G   P   D   S   F   P   D   R
           ATC TTC TTG CTG CGC AGG TGG GCT GCC AGG CAT GTG CAC CAC CAG GAC CAG GGA CCG GAC TCT TTT CCT GAT CGT
                                                            Exon 4

Variant 1   F   R   G   A   E   L   K   E   V   S   S   Q   E   S   N   A   Q   A   N   V   G   S   Q   E   P
Variant 2   F   R   G   A   E   L   K   E   V   S   S   Q   E   S   N   A   Q   A   N   V   G   S   Q   E   P
Variant 3   F   R   G   A   E   L   K   E   V   S   S   Q   E   S   N   A   Q   A   N   V   G   S   Q   E   P
           TTC CGT GGA GCC GAG CTT AAG GAG GTG TCC AGC CAA GAA AGC AAT GCC CAG GCA AAT GTG GGC AGC CAG GAG CCA

Variant 1   A   D   R   G   R   S   A   W   P   L   A   K   C   N   T   N   T   S   N   N   T   E   E   E   K
Variant 2   A   D   R   G   R   R                                                                           K
Variant 3   A   D   R   G   R   R                                                                           K
           GCA GAC AGA GGG AGA AGC GCC TGG CCC CTG GCC AAA TGC AAC ACT AAC ACC AGC AAC AAC ACG GAG GAG GAG AAG
                                                            Exon 5

Variant 1   K   T   K   K   K   D   A   I   V   V   D   P   S   S   N   L   Y   Y   R   W   L   T   A   I   A
Variant 2   K   T   K   K   K   D   A   I   V   V   D   P   S   S   N   L   Y   Y   R   W   L   T   A   I   A
Variant 3   K   T   K   K   K   D   A   I   V   V   D   P   S   S   N   L   Y   Y   R   W   L   T   A   I   A
           AAG ACG AAA AAG AAG GAT GCG ATC GTG GTG GAC CCG TCC AGC AAC CTG TAC TAC CGC TGG CTG ACC GCC ATC GCC
                                                            Exon 7

Cassar, Mol Vis 2004; 10:808-813 <http://www.molvis.org/molvis/v10/a96/>
©2004 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535