Table 1 of
Frederikse, Mol Vis 2004;
10:794-804.
Table 1. Oligonucleotide primers used for RT-PCR amplification of specific gene transcripts
Genbank accession numbers and exon position are indicated. (the asterisk indicates exon number inferred from human or rat gene homologues).
Accession
Gene number Sequence Exon
------- --------- -------------------------------- ----
AβPP MUSABPPA 1553-TGCTCTACAATGTCCCTGCGG-1573 13
2033-ACCATGAGTCCGATGATGGCG-2013 17
APLPI BC021877 372-GTACTGCAGACAGATGTACC-391 1
894-CTCTTCTTCTTCAGCCTGAG-875 7
APLPII NM009691 176-TGGCTGGCTACATAGAGGCT-195 1
466-TGTGACTCTTGCACTGCCTT-447 3
Tau BC014748 555-ATCCCTACCAACACCG-570 9*
850-GCTTGTAGACTATTTGCACA-831 11*
JIP1b AF054611 1355-AGTGACGAAAGCGACT-1350
1809-CGCTGTTTTTGGCAAGG-1793
KLCI BK000675 1005-GTACGGTAAGCGAGGG-1020
1519-GCCGTCGGTAAAGTGC-1504
KLCII AF055666 758-TTCACAAGGCCGCTATG-774
1177-CTCCGGTAGTAGTATTCCAC-1158
Fe65 BC048395 905-GGGACTTTGCCTACGT-920 2*
1348-AGGAGAGAAACCGCAC-1333 3*
KIF5A BC058396 1396-CATTGTGGTACGCATCG-1412
1682-GGTCGTAGTTGACCGC-1667
KIF5B NM008448 2246-GGTGAGGAGCTAGTCC-2261
2648-GCTTACGCAGGTTGTG-2633
PKA M12303 743-GACAGACTTCGGTTTTGC-760 7
1168-AGTTACTCGTGTCCCCA-1152 10
CamKI NM144817 471-CTGCGGTGAAATACCTT-487
881-ACCGTTCGTTTGGGTC-866
Syn I BC022954 1686-CAGGGTCAAGGCCGCCAGTC-1705
1958-CACATCCTGGCTGGGTTTCTG-1938
Syn II NM013681 903-AGGGGAGAAATTCCCAC-919
1252-CCCAGAGCTTGTACCG-1237
Syn III NM_013722 1566-CCAACAGCGACTCTCG-1581
1903-GGTTGCGGATTGTCTC-1888
Syt I BC042519 873-ATACTCGGAATTAGGTGGC-891
1281-TTGCTCGAACGGAACT-1266
SypI BC014823 154-TGCCAACAAGACGGAG-169 3*
463-GGCGGATGAGCTAACT-448 4*
Rab5 D86066 605-TTCTGTCGTGATGCCC-620
908-CTGGTCGTTGGCCTTC-893
Rab3A NM019400 564-TGTCACACTTGTTTCCCA-547 4*
197-CCAGAACTTCGACTATATGTTC-218 2*
134-GCTTAGAGAGGGTAAGATGG-153 2*
433-GCGCCTCGGTAATAGG-418 3*
GAPDH BC020407 582-TCCACCACCCTGTTGCT-603
1032-CCACAGTCCATGCCATCACTGC-1016
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