Table 1 of Frederikse, Mol Vis 2004; 10:794-804.


Table 1. Oligonucleotide primers used for RT-PCR amplification of specific gene transcripts

Genbank accession numbers and exon position are indicated. (the asterisk indicates exon number inferred from human or rat gene homologues).

          Accession
 Gene      number                Sequence                Exon
-------   ---------   --------------------------------   ----
AβPP      MUSABPPA    1553-TGCTCTACAATGTCCCTGCGG-1573    13
                      2033-ACCATGAGTCCGATGATGGCG-2013    17
APLPI     BC021877    372-GTACTGCAGACAGATGTACC-391        1
                      894-CTCTTCTTCTTCAGCCTGAG-875        7
APLPII    NM009691    176-TGGCTGGCTACATAGAGGCT-195        1
                      466-TGTGACTCTTGCACTGCCTT-447        3
Tau       BC014748    555-ATCCCTACCAACACCG-570            9*
                      850-GCTTGTAGACTATTTGCACA-831       11*
JIP1b     AF054611    1355-AGTGACGAAAGCGACT-1350
                      1809-CGCTGTTTTTGGCAAGG-1793
KLCI      BK000675    1005-GTACGGTAAGCGAGGG-1020
                      1519-GCCGTCGGTAAAGTGC-1504
KLCII     AF055666    758-TTCACAAGGCCGCTATG-774
                      1177-CTCCGGTAGTAGTATTCCAC-1158
Fe65      BC048395    905-GGGACTTTGCCTACGT-920            2*
                      1348-AGGAGAGAAACCGCAC-1333          3*
KIF5A     BC058396    1396-CATTGTGGTACGCATCG-1412
                      1682-GGTCGTAGTTGACCGC-1667
KIF5B     NM008448    2246-GGTGAGGAGCTAGTCC-2261
                      2648-GCTTACGCAGGTTGTG-2633
PKA       M12303      743-GACAGACTTCGGTTTTGC-760          7
                      1168-AGTTACTCGTGTCCCCA-1152        10
CamKI     NM144817    471-CTGCGGTGAAATACCTT-487
                      881-ACCGTTCGTTTGGGTC-866
Syn I     BC022954    1686-CAGGGTCAAGGCCGCCAGTC-1705
                      1958-CACATCCTGGCTGGGTTTCTG-1938
Syn II    NM013681    903-AGGGGAGAAATTCCCAC-919
                      1252-CCCAGAGCTTGTACCG-1237
Syn III   NM_013722   1566-CCAACAGCGACTCTCG-1581
                      1903-GGTTGCGGATTGTCTC-1888
Syt I     BC042519    873-ATACTCGGAATTAGGTGGC-891
                      1281-TTGCTCGAACGGAACT-1266
SypI      BC014823    154-TGCCAACAAGACGGAG-169            3*
                      463-GGCGGATGAGCTAACT-448            4*
Rab5      D86066      605-TTCTGTCGTGATGCCC-620
                      908-CTGGTCGTTGGCCTTC-893
Rab3A     NM019400    564-TGTCACACTTGTTTCCCA-547          4*
                      197-CCAGAACTTCGACTATATGTTC-218      2*
                      134-GCTTAGAGAGGGTAAGATGG-153        2*
                      433-GCGCCTCGGTAATAGG-418            3*
GAPDH     BC020407    582-TCCACCACCCTGTTGCT-603
                      1032-CCACAGTCCATGCCATCACTGC-1016

Frederikse, Mol Vis 2004; 10:794-804 <http://www.molvis.org/molvis/v10/a94/>
©2004 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535