Table 3 of Tasheva, Mol Vis 2004; 10:758-772.


Table 3. Gene specific primers used for human and bovine SLRPs

Primer pairs used for amplification of indicated human and bovine SLRPs and their corresponding amplicons are shown. The primer pair for human mimecan detects two differentially spliced mRNA isoforms. The first letter of the primer name indicates whether the primer is human (H) or bovine (B).

                 Accession    Primer                                                      Amplification
     Gene         number       name                 Primer sequence (5'-3')               product (bp)
--------------   ---------   ---------   ----------------------------------------------   -------------
Mimecan          NM_033014   Hmim+1      GGCTAATGCACAGACATGAACATCTATTGAGG                   506 & 230

                             Hmim-506    GCGTGAGTCCTGCTGGGTTGGTGG

Decorin          NM_001920   Hdec+124    GGGCTGGACCGTTTCAACAGAGAGG                             586

                             Hdec-710    GTATCAGCAATGCAAATGTAGGAG

Biglycan         NM_001711   Hbgn+964    GATCAGGATGATCGAGAACGGGAG                              280

                             Hbng-1244   GGTCAGTGACGCAGCGGAAAGTGG

Mimecan          M37974      Bm+411      TTTAGGATCCATTAAAATGAAGACTCTGCAATCTACACTTCTCCTG        902

                             Bm-1313     GATAGCTCGAGAATGTATGACCCTATAGG

Keratocan        U48360      Bkera+150   ATGGATCCATGGCATCCACAATCTGCTTCATCCTCTGGG               189

                             Bkera-339   CAGTACAAAGCAGTAGGGAAACTGGGGG

Lumican          L11063      Blum+671    TGACTTGAGCTTCAATCAGATGACC                             503

                             Blum-1174   CCATAAACTGCTGTTCCAGGCTACACC

Chondroadherin   NM_174019   Bchad+595   CTCAGTTCCCTGCAGCCCGGCGCTC                             272

                             Bchad-867   CATGTTTCAGCGTGGTCACACCC

Tasheva, Mol Vis 2004; 10:758-772 <http://www.molvis.org/molvis/v10/a91/>
©2004 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535