Table 4 of
Ida, Mol Vis 2004;
10:439-444.Table 4 of
Ida, Mol Vis 2004;
10:439-444.
Table 4. Characteristic and abundant clones in the retina library
ESTs with more than 10 clones in the retina library are listed. Characteristic retina markers are also listed and indicated in red in the description column. Representative GenBank entries with chromosomal location and the number of clones are shown. The ratio of frequency of occurrence of each gene in the mouse (M) and human (H) libraries is given in the M/H column. An asterisk ("*") indicates no clones were found in the human library.
Number
Rank Description GenBank Chromosome of clones M/H
---- ------------------------------------- --------- ---------- --------- ----
1 rhodopsin NM_145383 6 157 1
2 alpha transducin NM_008140 9 112 4
3 peripherin 2 NM_008938 17 41 10
4 phosducin L08075 1 38 37
5 GAPDH XM_124295 6 28 0.5
6 elongation factor 1 alpha 1 AK050635 9 27 0.5
7 S-antigen M24086 1 24 0.7
8 enolase 1 NM_023119 4 22 2
9 tubulin, alpha XM_128256 15 21 2
10 aldolase 1 NM_007438 7 21 1
11 phosphodiesterase 6B X60133 5 20 20
12 ubiquitin B NM_011664 11 19 9
13 interstitial retinol binding protein NM_015745 14 16 2
14 ROM1 NM_009073 19 16 0.7
15 pyruvate kinase, muscle NM_011099 9 16 0.7
16 guanylate cyclase activator 1B NM_146079 17 15 5
17 GCAP2 NM_008142 4 14 2
18 phosphoglycerate mutase 1 XM_124890 19 13 1
19 ornithine decarboxylase antizyme NM_008753 10 11 2
20 RIKEN cDNA 2900052E22 gene BC028989 7 11 4
21 vitronectin NM_011707 11 11 *
22 heat shock protein 8 U27129 9 11 2
23 phosphodiesterase 6G AF190928 11 10 0.2
26 unc119 homolog AF030169 11 10 0.6
42 neural retina leucine zipper gene L14935 14 8 0.4
77 phosphodiesterase 6A NM_146086 18 5 1
102 retinoschisis 1 (X-linked, juvenile) AF073780 X 4 2
171 recoverin NM_009038 11 3 10
185 GCAP L36860 17 3 0.3
551 IPM 150 proteoglycan AF266478 9 2 0.5
1930 vax2 AF028715 6 1 1
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