Table 2 of Paluru, Mol Vis 2004; 10:917-922.


Table 2. LUM and FMOD gene primers designed for mutation screening

Lumican (LUM) and Fibromodulin (FMOD) gene polymerase chain reaction primer pairs designed for mutation screening. Six primer pairs were designed for LUM gene (3 Exons). Two primer pairs and three nested primers were designed for FMOD gene (2 Exons). The forward and reverse primers are identified by an "F" and "R" suffix, respectively.

                      Position
      Exon     Size   on contig       Primer Sequence 5'-3'          Primer
    --------   ----   ---------   ------------------------------   -----------

Contig NT_019546

       1        710   14987011    TTCTTTGCTCCAGTATTAGGGTCC         LUM1F
                      14987721    AAAAATGTTCTCACAGTGAGCTTCC        LUM1R
       2A       919   14983585    TTAATTGTTCCTTATCTGGATAC          LUM2AF
                      14984504    TGCAGCTTACTCATAACAAG             LUM2AR
       2B       787   14984369    GAAGCTCAAGTCAAGGTATTCG           LUM2BF
                      14985156    CTAACCTGAAAGCTGCTCACTAC          LUM2BR
       2C       592   14984146    TTTTAAGCTTGTTATAGGACAGA          LUM2CF
                      14984738    GCCTCCTGGAATCAAGTAT              LUM2CR
       3A      1262   14979221    TCACATAGCAGCTTCTTATCTA           LUM3AF
                      14980483    TCTTGATCTACCATGATTACTCT          LUM3AR
       3B       547   14979222    CACATAGCAGCTTCTTATCTA            LUM3BF
                      14979769    AAATACATATGGATGTTACTCTC          LUM3BR

Contig NT_004671

       1       1579   14671023    CATTTCCCAGCTGTCCCCCTACATCG       FMOD1F
                      14672579    TCACCCCAAATAGCCATGGTCCG          FMOD1R
       2       2611   14664068    GAGTTGTAACATTTGCAACATGCTTGGTAC   FMOD2F
                      14666650    CTAATCTCACTGTGGCTTCAGGTTCGTAA    FMOD2R
    2-Nested          14666058    CTGTGCTGGGCTGGTCGT               FMOD2(589F)
    2-Nested          14665613    AATGGGCCAAACACACCT               FMOD(1034F)
    2-Nested          14665126    TAACCCACCTGCCCTTTG               FMOD(1521F)

Paluru, Mol Vis 2004; 10:917-922 <http://www.molvis.org/molvis/v10/a110/>
©2004 Molecular Vision <http://www.molvis.org/molvis/>
ISSN 1090-0535