rs6873404 - SNP

Select item 68734041.

rs6873404 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 5:83553301 (GRCh38)
5:82849120 (GRCh37)
Canonical SPDI:: NC_000005.10:83553300:T:A,NC_000005.10:83553300:T:C,NC_000005.10:83553300:T:G
Gene:: VCAN (Varview), VCAN-AS1 (Varview)
Functional Consequence:: intron_variant
Clinical significance:: benign
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.428807/4415 (ALFA)
T=0.313636/138 (SGDP_PRJ)
T=0.347222/75 (Qatari)
T=0.35/14 (GENOME_DK)
T=0.357143/15 (Siberian)
T=0.402622/215 (MGP)
T=0.426959/59758 (GnomAD)
T=0.428218/113345 (TOPMED)
T=0.4375/140 (HapMap)
T=0.439413/2201 (1000Genomes)
T=0.44/264 (NorthernSweden)
T=0.45491/454 (GoNL)
A=0.456596/1336 (KOREAN)
A=0.462617/99 (Vietnamese)
T=0.469071/7862 (TOMMO)
T=0.469525/1741 (TWINSUK)
A=0.470524/862 (Korea1K)
T=0.478983/1846 (ALSPAC)
T=0.488839/2190 (Estonian)
HGVS:: NC_000005.10:g.83553301T>A, NC_000005.10:g.83553301T>C, NC_000005.10:g.83553301T>G, NC_000005.9:g.82849120T>A, NC_000005.9:g.82849120T>C, NC_000005.9:g.82849120T>G, NG_012682.1:g.86591T>A, NG_012682.1:g.86591T>C, NG_012682.1:g.86591T>G

Select item 610167332.

rs61016733 has merged into rs6873404 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 5:83553301 (GRCh38)
5:82849120 (GRCh37)
Canonical SPDI:: NC_000005.10:83553300:T:A,NC_000005.10:83553300:T:C,NC_000005.10:83553300:T:G
Gene:: VCAN (Varview), VCAN-AS1 (Varview)
Functional Consequence:: intron_variant
Clinical significance:: benign
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.428807/4415 (ALFA)
T=0.313636/138 (SGDP_PRJ)
T=0.347222/75 (Qatari)
T=0.35/14 (GENOME_DK)
T=0.357143/15 (Siberian)
T=0.402622/215 (MGP)
T=0.426959/59758 (GnomAD)
T=0.428218/113345 (TOPMED)
T=0.4375/140 (HapMap)
T=0.439413/2201 (1000Genomes)
T=0.44/264 (NorthernSweden)
T=0.45491/454 (GoNL)
A=0.456596/1336 (KOREAN)
A=0.462617/99 (Vietnamese)
T=0.469071/7862 (TOMMO)
T=0.469525/1741 (TWINSUK)
A=0.470524/862 (Korea1K)
T=0.478983/1846 (ALSPAC)
T=0.488839/2190 (Estonian)
HGVS:: NC_000005.10:g.83553301T>A, NC_000005.10:g.83553301T>C, NC_000005.10:g.83553301T>G, NC_000005.9:g.82849120T>A, NC_000005.9:g.82849120T>C, NC_000005.9:g.82849120T>G, NG_012682.1:g.86591T>A, NG_012682.1:g.86591T>C, NG_012682.1:g.86591T>G

Select item 176841963.

rs17684196 has merged into rs6873404 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 5:83553301 (GRCh38)
5:82849120 (GRCh37)
Canonical SPDI:: NC_000005.10:83553300:T:A,NC_000005.10:83553300:T:C,NC_000005.10:83553300:T:G
Gene:: VCAN (Varview), VCAN-AS1 (Varview)
Functional Consequence:: intron_variant
Clinical significance:: benign
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.428807/4415 (ALFA)
T=0.313636/138 (SGDP_PRJ)
T=0.347222/75 (Qatari)
T=0.35/14 (GENOME_DK)
T=0.357143/15 (Siberian)
T=0.402622/215 (MGP)
T=0.426959/59758 (GnomAD)
T=0.428218/113345 (TOPMED)
T=0.4375/140 (HapMap)
T=0.439413/2201 (1000Genomes)
T=0.44/264 (NorthernSweden)
T=0.45491/454 (GoNL)
A=0.456596/1336 (KOREAN)
A=0.462617/99 (Vietnamese)
T=0.469071/7862 (TOMMO)
T=0.469525/1741 (TWINSUK)
A=0.470524/862 (Korea1K)
T=0.478983/1846 (ALSPAC)
T=0.488839/2190 (Estonian)
HGVS:: NC_000005.10:g.83553301T>A, NC_000005.10:g.83553301T>C, NC_000005.10:g.83553301T>G, NC_000005.9:g.82849120T>A, NC_000005.9:g.82849120T>C, NC_000005.9:g.82849120T>G, NG_012682.1:g.86591T>A, NG_012682.1:g.86591T>C, NG_012682.1:g.86591T>G

dbSNP