rs3813571 - SNP

Select item 38135711.

rs3813571 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 15:78540450 (GRCh38)
15:78832792 (GRCh37)
Canonical SPDI:: NC_000015.10:78540449:G:T
Gene:: PSMA4 (Varview)
Functional Consequence:: 5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.385429/66448 (ALFA)
T=0.086347/1447 (TOMMO)
T=0.113993/334 (KOREAN)
T=0.129244/236 (Korea1K)
T=0.180556/39 (Vietnamese)
T=0.208774/395 (HapMap)
T=0.23173/1161 (1000Genomes)
T=0.240741/52 (Qatari)
T=0.246006/154 (Chileans)
T=0.299176/79189 (TOPMED)
T=0.3/12 (GENOME_DK)
T=0.316047/44301 (GnomAD)
G=0.396552/92 (SGDP_PRJ)
T=0.412723/1849 (Estonian)
T=0.421844/421 (GoNL)
T=0.438765/1691 (ALSPAC)
T=0.445254/1651 (TWINSUK)
T=0.448333/269 (NorthernSweden)
G=0.458333/11 (Siberian)
HGVS:: NC_000015.10:g.78540450G>T, NC_000015.9:g.78832792G>T, NM_002789.6:c.-113G>T, NM_002789.5:c.-113G>T, NM_002789.4:c.-113G>T, NM_001102668.3:c.-163G>T, NM_001102668.2:c.-163G>T, NM_001102668.1:c.-163G>T, NM_001330675.2:c.-113G>T, NM_001330675.1:c.-113G>T, NM_001330673.2:c.-113G>T, NM_001330673.1:c.-113G>T, NM_001102667.2:c.-37G>T, NM_001102667.1:c.-37G>T

Select item 603678172.

rs60367817 has merged into rs3813571 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 15:78540450 (GRCh38)
15:78832792 (GRCh37)
Canonical SPDI:: NC_000015.10:78540449:G:T
Gene:: PSMA4 (Varview)
Functional Consequence:: 5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.385429/66448 (ALFA)
T=0.086347/1447 (TOMMO)
T=0.113993/334 (KOREAN)
T=0.129244/236 (Korea1K)
T=0.180556/39 (Vietnamese)
T=0.208774/395 (HapMap)
T=0.23173/1161 (1000Genomes)
T=0.240741/52 (Qatari)
T=0.246006/154 (Chileans)
T=0.299176/79189 (TOPMED)
T=0.3/12 (GENOME_DK)
T=0.316047/44301 (GnomAD)
G=0.396552/92 (SGDP_PRJ)
T=0.412723/1849 (Estonian)
T=0.421844/421 (GoNL)
T=0.438765/1691 (ALSPAC)
T=0.445254/1651 (TWINSUK)
T=0.448333/269 (NorthernSweden)
G=0.458333/11 (Siberian)
HGVS:: NC_000015.10:g.78540450G>T, NC_000015.9:g.78832792G>T, NM_002789.6:c.-113G>T, NM_002789.5:c.-113G>T, NM_002789.4:c.-113G>T, NM_001102668.3:c.-163G>T, NM_001102668.2:c.-163G>T, NM_001102668.1:c.-163G>T, NM_001330675.2:c.-113G>T, NM_001330675.1:c.-113G>T, NM_001330673.2:c.-113G>T, NM_001330673.1:c.-113G>T, NM_001102667.2:c.-37G>T, NM_001102667.1:c.-37G>T

Select item 564557943.

rs56455794 has merged into rs3813571 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 15:78540450 (GRCh38)
15:78832792 (GRCh37)
Canonical SPDI:: NC_000015.10:78540449:G:T
Gene:: PSMA4 (Varview)
Functional Consequence:: 5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.385429/66448 (ALFA)
T=0.086347/1447 (TOMMO)
T=0.113993/334 (KOREAN)
T=0.129244/236 (Korea1K)
T=0.180556/39 (Vietnamese)
T=0.208774/395 (HapMap)
T=0.23173/1161 (1000Genomes)
T=0.240741/52 (Qatari)
T=0.246006/154 (Chileans)
T=0.299176/79189 (TOPMED)
T=0.3/12 (GENOME_DK)
T=0.316047/44301 (GnomAD)
G=0.396552/92 (SGDP_PRJ)
T=0.412723/1849 (Estonian)
T=0.421844/421 (GoNL)
T=0.438765/1691 (ALSPAC)
T=0.445254/1651 (TWINSUK)
T=0.448333/269 (NorthernSweden)
G=0.458333/11 (Siberian)
HGVS:: NC_000015.10:g.78540450G>T, NC_000015.9:g.78832792G>T, NM_002789.6:c.-113G>T, NM_002789.5:c.-113G>T, NM_002789.4:c.-113G>T, NM_001102668.3:c.-163G>T, NM_001102668.2:c.-163G>T, NM_001102668.1:c.-163G>T, NM_001330675.2:c.-113G>T, NM_001330675.1:c.-113G>T, NM_001330673.2:c.-113G>T, NM_001330673.1:c.-113G>T, NM_001102667.2:c.-37G>T, NM_001102667.1:c.-37G>T

dbSNP