rs162561 - SNP

Select item 1625611.

rs162561 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 2:38071734 (GRCh38)
2:38298877 (GRCh37)
Canonical SPDI:: NC_000002.12:38071733:T:A,NC_000002.12:38071733:T:C,NC_000002.12:38071733:T:G
Gene:: CYP1B1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.165745/22721 (ALFA)
C=0./0 (KOREAN)
T=0.056075/12 (Vietnamese)
T=0.059783/33 (SGDP_PRJ)
T=0.087336/160 (Korea1K)
T=0.102124/511 (1000Genomes)
T=0.104651/198 (HapMap)
T=0.111111/24 (Qatari)
T=0.12669/2123 (TOMMO)
T=0.139937/37040 (TOPMED)
T=0.143333/86 (NorthernSweden)
T=0.148148/8 (Siberian)
T=0.1863/718 (ALSPAC)
T=0.193387/193 (GoNL)
T=0.200917/745 (TWINSUK)
T=0.207143/928 (Estonian)
T=0.275/11 (GENOME_DK)
HGVS:: NC_000002.12:g.38071734T>A, NC_000002.12:g.38071734T>C, NC_000002.12:g.38071734T>G, NC_000002.11:g.38298877T>A, NC_000002.11:g.38298877T>C, NC_000002.11:g.38298877T>G, NG_008386.2:g.9368A>T, NG_008386.2:g.9368A>G, NG_008386.2:g.9368A>C

Select item 3865399742.

rs386539974 has merged into rs162561 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 2:38071734 (GRCh38)
2:38298877 (GRCh37)
Canonical SPDI:: NC_000002.12:38071733:T:A,NC_000002.12:38071733:T:C,NC_000002.12:38071733:T:G
Gene:: CYP1B1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.165745/22721 (ALFA)
C=0./0 (KOREAN)
T=0.056075/12 (Vietnamese)
T=0.059783/33 (SGDP_PRJ)
T=0.087336/160 (Korea1K)
T=0.102124/511 (1000Genomes)
T=0.104651/198 (HapMap)
T=0.111111/24 (Qatari)
T=0.12669/2123 (TOMMO)
T=0.139937/37040 (TOPMED)
T=0.143333/86 (NorthernSweden)
T=0.148148/8 (Siberian)
T=0.1863/718 (ALSPAC)
T=0.193387/193 (GoNL)
T=0.200917/745 (TWINSUK)
T=0.207143/928 (Estonian)
T=0.275/11 (GENOME_DK)
HGVS:: NC_000002.12:g.38071734T>A, NC_000002.12:g.38071734T>C, NC_000002.12:g.38071734T>G, NC_000002.11:g.38298877T>A, NC_000002.11:g.38298877T>C, NC_000002.11:g.38298877T>G, NG_008386.2:g.9368A>T, NG_008386.2:g.9368A>G, NG_008386.2:g.9368A>C

Select item 580063093.

rs58006309 has merged into rs162561 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 2:38071734 (GRCh38)
2:38298877 (GRCh37)
Canonical SPDI:: NC_000002.12:38071733:T:A,NC_000002.12:38071733:T:C,NC_000002.12:38071733:T:G
Gene:: CYP1B1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.165745/22721 (ALFA)
C=0./0 (KOREAN)
T=0.056075/12 (Vietnamese)
T=0.059783/33 (SGDP_PRJ)
T=0.087336/160 (Korea1K)
T=0.102124/511 (1000Genomes)
T=0.104651/198 (HapMap)
T=0.111111/24 (Qatari)
T=0.12669/2123 (TOMMO)
T=0.139937/37040 (TOPMED)
T=0.143333/86 (NorthernSweden)
T=0.148148/8 (Siberian)
T=0.1863/718 (ALSPAC)
T=0.193387/193 (GoNL)
T=0.200917/745 (TWINSUK)
T=0.207143/928 (Estonian)
T=0.275/11 (GENOME_DK)
HGVS:: NC_000002.12:g.38071734T>A, NC_000002.12:g.38071734T>C, NC_000002.12:g.38071734T>G, NC_000002.11:g.38298877T>A, NC_000002.11:g.38298877T>C, NC_000002.11:g.38298877T>G, NG_008386.2:g.9368A>T, NG_008386.2:g.9368A>G, NG_008386.2:g.9368A>C

Select item 1630884.

rs163088 has merged into rs162561 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 2:38071734 (GRCh38)
2:38298877 (GRCh37)
Canonical SPDI:: NC_000002.12:38071733:T:A,NC_000002.12:38071733:T:C,NC_000002.12:38071733:T:G
Gene:: CYP1B1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.165745/22721 (ALFA)
C=0./0 (KOREAN)
T=0.056075/12 (Vietnamese)
T=0.059783/33 (SGDP_PRJ)
T=0.087336/160 (Korea1K)
T=0.102124/511 (1000Genomes)
T=0.104651/198 (HapMap)
T=0.111111/24 (Qatari)
T=0.12669/2123 (TOMMO)
T=0.139937/37040 (TOPMED)
T=0.143333/86 (NorthernSweden)
T=0.148148/8 (Siberian)
T=0.1863/718 (ALSPAC)
T=0.193387/193 (GoNL)
T=0.200917/745 (TWINSUK)
T=0.207143/928 (Estonian)
T=0.275/11 (GENOME_DK)
HGVS:: NC_000002.12:g.38071734T>A, NC_000002.12:g.38071734T>C, NC_000002.12:g.38071734T>G, NC_000002.11:g.38298877T>A, NC_000002.11:g.38298877T>C, NC_000002.11:g.38298877T>G, NG_008386.2:g.9368A>T, NG_008386.2:g.9368A>G, NG_008386.2:g.9368A>C

dbSNP