rs13925 - SNP

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Select item 139251.

rs13925 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:46016326 (GRCh38)
20:44644965 (GRCh37)
Canonical SPDI:: NC_000020.11:46016325:G:A
Gene:: MMP9 (Varview), SLC12A5-AS1 (Varview)
Functional Consequence:: synonymous_variant,intron_variant,coding_sequence_variant
Clinical significance:: benign
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.140633/38598 (ALFA)
A=0.131741/386 (KOREAN)
A=0.133734/245 (Korea1K)
A=0.134831/72 (MGP)
A=0.13754/510 (TWINSUK)
A=0.138649/36699 (TOPMED)
A=0.141858/1845 (GoESP)
A=0.143198/20058 (GnomAD)
A=0.144502/11372 (PAGE_STUDY)
A=0.145521/36588 (GnomAD_exomes)
A=0.145823/562 (ALSPAC)
A=0.148862/18068 (ExAC)
A=0.150301/150 (GoNL)
A=0.160369/803 (1000Genomes)
A=0.160714/99 (Vietnamese)
A=0.163291/129 (PRJEB37584)
A=0.166667/36 (Qatari)
A=0.175/7 (GENOME_DK)
A=0.177632/54 (FINRISK)
A=0.183333/110 (NorthernSweden)
A=0.189732/850 (Estonian)
A=0.191273/3206 (TOMMO)
G=0.444444/8 (Siberian)
G=0.477273/63 (SGDP_PRJ)
HGVS:: NC_000020.11:g.46016326G>A, NC_000020.10:g.44644965G>A, NG_011468.1:g.12419G>A, NM_004994.3:c.2082G>A, NM_004994.2:c.2082G>A

Select item 31972212.

rs3197221 has merged into rs13925 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:46016326 (GRCh38)
20:44644965 (GRCh37)
Canonical SPDI:: NC_000020.11:46016325:G:A
Gene:: MMP9 (Varview), SLC12A5-AS1 (Varview)
Functional Consequence:: synonymous_variant,intron_variant,coding_sequence_variant
Clinical significance:: benign
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.140633/38598 (ALFA)
A=0.131741/386 (KOREAN)
A=0.133734/245 (Korea1K)
A=0.134831/72 (MGP)
A=0.13754/510 (TWINSUK)
A=0.138649/36699 (TOPMED)
A=0.141858/1845 (GoESP)
A=0.143198/20058 (GnomAD)
A=0.144502/11372 (PAGE_STUDY)
A=0.145521/36588 (GnomAD_exomes)
A=0.145823/562 (ALSPAC)
A=0.148862/18068 (ExAC)
A=0.150301/150 (GoNL)
A=0.160369/803 (1000Genomes)
A=0.160714/99 (Vietnamese)
A=0.163291/129 (PRJEB37584)
A=0.166667/36 (Qatari)
A=0.175/7 (GENOME_DK)
A=0.177632/54 (FINRISK)
A=0.183333/110 (NorthernSweden)
A=0.189732/850 (Estonian)
A=0.191273/3206 (TOMMO)
G=0.444444/8 (Siberian)
G=0.477273/63 (SGDP_PRJ)
HGVS:: NC_000020.11:g.46016326G>A, NC_000020.10:g.44644965G>A, NG_011468.1:g.12419G>A, NM_004994.3:c.2082G>A, NM_004994.2:c.2082G>A